BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026015
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|1...   122   1e-25
ref|NP_568404.1| RING/U-box domain-containing protein [Arabidops...   119   7e-25
ref|NP_189929.1| RING/U-box domain-containing protein [Arabidops...   119   1e-24
ref|XP_002877274.1| zinc finger family protein [Arabidopsis lyra...   117   4e-24
ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Rici...   117   4e-24

>ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|118483893|gb|ABK93837.1|
           unknown [Populus trichocarpa]
           gi|222855423|gb|EEE92970.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
 Frame = +1

Query: 160 LLYKAGLFIISLMSRWLLGPMSSLWDAYNHDDDGDDEARRHQHRVSAQAVRKMLQVATFR 339
           LLYKA L +  L  RW L       +  +     +D  RR     S+Q +R  L + TF 
Sbjct: 15  LLYKAALVLAVL--RWALAWALRFKNRTHLASPSNDSLRRSHPVPSSQQIRDGLILTTFG 72

Query: 340 DIVSAGAAVEGSSCAVCLNQVRSRDRVWELRNCSHIFHKRCLDRWLDHD-----DQLTCP 504
           D+      V   +CAVCL+Q+R +D V ELRNC H+FH+ C+DRW+DHD     +  TCP
Sbjct: 73  DVTERMPGV-CDTCAVCLSQLRDQDEVRELRNCCHVFHRDCIDRWVDHDHEHDENHNTCP 131

Query: 505 LCRAPLLASRGAATSLLSPSEASWAVEKLLYLFGDDLL 618
           LCRAPLL +  + +   + +E SWAVE++LYLFGDDL+
Sbjct: 132 LCRAPLLTT--SQSLARTRAEPSWAVERILYLFGDDLV 167


>ref|NP_568404.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|16209696|gb|AAL14405.1| AT5g20880/F22D1_50
           [Arabidopsis thaliana] gi|23463037|gb|AAN33188.1|
           At5g20880/F22D1_50 [Arabidopsis thaliana]
           gi|26451529|dbj|BAC42862.1| unknown protein [Arabidopsis
           thaliana] gi|332005517|gb|AED92900.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 176

 Score =  119 bits (299), Expect = 7e-25
 Identities = 68/166 (40%), Positives = 90/166 (54%), Gaps = 14/166 (8%)
 Frame = +1

Query: 160 LLYKAGLFIISLMSRWLLGPMSSLWDAYNHDDDGDDEARRHQHRVSAQAVRKMLQVATFR 339
           LLYK  + I  L  RW+L  +      Y         +      +S+QA+++ L V TFR
Sbjct: 15  LLYKMAVLITVL--RWILAWILR----YRSRSRSTSSSTSACPSISSQAIKESLSVTTFR 68

Query: 340 DIVSAGAAVEGSSCAVCLNQVRSRDRVWELRNCSHIFHKRCLDRWLDH------------ 483
           D      A+   +CAVCL  +   D V ELRNCSH+FH+ C+DRWLD+            
Sbjct: 69  DAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGE 128

Query: 484 -DDQLTCPLCRAPLLASRGAAT-SLLSPSEASWAVEKLLYLFGDDL 615
            D+  TCPLCR PLLA+   +     + +E SWAVE+LLYLFGDDL
Sbjct: 129 EDNHRTCPLCRTPLLAANTTSCGDWPTKNEPSWAVERLLYLFGDDL 174


>ref|NP_189929.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|7263618|emb|CAB81584.1| putative protein [Arabidopsis
           thaliana] gi|51968876|dbj|BAD43130.1| putative protein
           [Arabidopsis thaliana] gi|332644271|gb|AEE77792.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 167

 Score =  119 bits (297), Expect = 1e-24
 Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
 Frame = +1

Query: 160 LLYKAGLFIISLMSRWLLGPMSSLWDAYNHDDDGDDEARRHQHRVSAQAVRKMLQVATFR 339
           +LYK  L I  L  RW+    + +    +               +S+Q +++ L V+ FR
Sbjct: 15  VLYKTALIITVL--RWIF---AWILRYRSRSSSSSSSQSSSSPSISSQTIKESLAVSAFR 69

Query: 340 DIVSAGAAVEGSSCAVCLNQVRSRDRVWELRNCSHIFHKRCLDRWLDH-------DDQLT 498
           D V    A     CAVCL  +   D + ELRNC+H+FH+ C+DRWLD+       D+  T
Sbjct: 70  DAVERSPAAINDMCAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRT 129

Query: 499 CPLCRAPLLASRGAATSLLSPSEASWAVEKLLYLFGDDLL 618
           CPLCR PLL S    T   + ++ SWAVE+LLYLFGDDLL
Sbjct: 130 CPLCRTPLLPS---FTDYSTVTQTSWAVERLLYLFGDDLL 166


>ref|XP_002877274.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323112|gb|EFH53533.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  117 bits (292), Expect = 4e-24
 Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
 Frame = +1

Query: 160 LLYKAGLFIISLMSRWLLGPMSSLWDAYNHDDDGDDEARRHQHR--VSAQAVRKMLQVAT 333
           +LYK  + I  L  RW+       W            + +      +S+Q +++ L V  
Sbjct: 15  VLYKTAVIIAVL--RWIFA-----WSLRYRSRSSSSSSSQSSSTPLISSQTIKESLAVTA 67

Query: 334 FRDIVSAGAAVEGSSCAVCLNQVRSRDRVWELRNCSHIFHKRCLDRWL-------DHDDQ 492
           FRD V    A    +CAVCL  +   D + ELRNC+H+FH+ C+DRWL       D D+ 
Sbjct: 68  FRDAVERSPATINDTCAVCLGDLEDDDEIRELRNCNHVFHRDCIDRWLEYECRGGDEDNH 127

Query: 493 LTCPLCRAPLLASRGAATSLLSPSEASWAVEKLLYLFGDDLL 618
            TCPLCR PLL S    +++  P   SWAVE+LLYLFGDDLL
Sbjct: 128 RTCPLCRTPLLPSFSDCSTVNQP---SWAVERLLYLFGDDLL 166


>ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223544664|gb|EEF46180.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 177

 Score =  117 bits (292), Expect = 4e-24
 Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 12/168 (7%)
 Frame = +1

Query: 160 LLYKAGLFIISLMSRWLLGPM----SSLWDAYNHDDDGDDEARRHQHRVSAQAVRKMLQV 327
           LLYKA   +I  ++RW L       S  + + +     +D   +     S+Q +R  L +
Sbjct: 15  LLYKAA--VILAVARWALSWALRFRSRTYLSPSSSSSSNDSLHQSCALPSSQQIRDGLIL 72

Query: 328 ATFRDIVS--AGAAVEGSSCAVCLNQVRSRDRVWELRNCSHIFHKRCLDRWLDH-----D 486
            TF DI    +GA     +CAVCL Q+   D V ELRNC H+FHK C+DRW+DH     D
Sbjct: 73  TTFGDITDRISGAC---DTCAVCLGQLSELDEVRELRNCCHVFHKECIDRWVDHDHDHDD 129

Query: 487 DQLTCPLCRAPLL-ASRGAATSLLSPSEASWAVEKLLYLFGDDLLFPH 627
           +  TCPLCRAPLL AS+  A    +  E SWAVE++LYLFGDDL   +
Sbjct: 130 NHKTCPLCRAPLLTASQSLAWINNNKCEPSWAVERILYLFGDDLFMQY 177