BLASTX nr result

ID: Dioscorea21_contig00025725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025725
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan pr...   238   2e-60
emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]   235   1e-59
gb|ABR68797.1| arabinogalactan protein 2 [Gossypium hirsutum] gi...   233   5e-59
gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum]           233   7e-59
ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|1...   228   1e-57

>ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Vitis
           vinifera]
          Length = 244

 Score =  238 bits (606), Expect = 2e-60
 Identities = 116/152 (76%), Positives = 136/152 (89%)
 Frame = -3

Query: 766 TNITKILEKAGQFGTLIRLLKSTSTADQINGQLNNSNNGLTVFAPTDNAFTSLPSGTLNS 587
           TNIT+ILEKAGQ+  LIRL+K T  ADQIN QLNNSN GLTVFAPTDNAF++L +GTLNS
Sbjct: 35  TNITQILEKAGQYTILIRLMKGTQVADQINTQLNNSNQGLTVFAPTDNAFSTLKAGTLNS 94

Query: 586 LTDQQKVALIQFHVLPNLMTITQFQTASNPLRTQAGDSSDGKYPLNVTAVGNQVNISTGI 407
           LTDQQKV LIQFHV+PN ++I+QFQT SNPLRTQAG+S++G++PLNVT  GNQVN+STGI
Sbjct: 95  LTDQQKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQVNVSTGI 154

Query: 406 VNTTVSNTIYSDGQLAVYQVDKVLLPLDIFRP 311
           V+ TV+NT+Y+D QLAVYQVDKVLLPLDIF P
Sbjct: 155 VDATVANTVYTDNQLAVYQVDKVLLPLDIFAP 186


>emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]
          Length = 214

 Score =  235 bits (599), Expect = 1e-59
 Identities = 115/152 (75%), Positives = 135/152 (88%)
 Frame = -3

Query: 766 TNITKILEKAGQFGTLIRLLKSTSTADQINGQLNNSNNGLTVFAPTDNAFTSLPSGTLNS 587
           TNIT+ILEKAGQ+  LIRL+K T  ADQIN QL NSN GLTVFAPTDNAF++L +GTLNS
Sbjct: 19  TNITQILEKAGQYTILIRLMKGTQVADQINTQLXNSNQGLTVFAPTDNAFSTLKAGTLNS 78

Query: 586 LTDQQKVALIQFHVLPNLMTITQFQTASNPLRTQAGDSSDGKYPLNVTAVGNQVNISTGI 407
           LTDQQKV LIQFHV+PN ++I+QFQT SNPLRTQAG+S++G++PLNVT  GNQVN+STGI
Sbjct: 79  LTDQQKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQVNVSTGI 138

Query: 406 VNTTVSNTIYSDGQLAVYQVDKVLLPLDIFRP 311
           V+ TV+NT+Y+D QLAVYQVDKVLLPLDIF P
Sbjct: 139 VDATVANTVYTDNQLAVYQVDKVLLPLDIFAP 170


>gb|ABR68797.1| arabinogalactan protein 2 [Gossypium hirsutum]
           gi|157273636|gb|ABV27472.1| fasciclin-like
           arabinogalactan protein 1 [Gossypium hirsutum]
          Length = 243

 Score =  233 bits (594), Expect = 5e-59
 Identities = 113/152 (74%), Positives = 131/152 (86%)
 Frame = -3

Query: 766 TNITKILEKAGQFGTLIRLLKSTSTADQINGQLNNSNNGLTVFAPTDNAFTSLPSGTLNS 587
           TN+TKILEKAGQF   IRLLKST  A+Q+ GQLNNSNNG+TVFAPTDNAF+SL SGTLNS
Sbjct: 38  TNVTKILEKAGQFTLFIRLLKSTQVANQLLGQLNNSNNGMTVFAPTDNAFSSLKSGTLNS 97

Query: 586 LTDQQKVALIQFHVLPNLMTITQFQTASNPLRTQAGDSSDGKYPLNVTAVGNQVNISTGI 407
           LTD+QKV L+QFH++P  +T +QFQT SNPLRTQAGDS DGK+PLNVT  GN VNI+TG+
Sbjct: 98  LTDEQKVQLVQFHIVPTYLTSSQFQTISNPLRTQAGDSGDGKFPLNVTTSGNSVNITTGL 157

Query: 406 VNTTVSNTIYSDGQLAVYQVDKVLLPLDIFRP 311
            NT+VS TIY+DGQLAVYQ+D+VL PL IF P
Sbjct: 158 TNTSVSGTIYTDGQLAVYQIDQVLQPLQIFAP 189


>gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum]
          Length = 243

 Score =  233 bits (593), Expect = 7e-59
 Identities = 112/152 (73%), Positives = 131/152 (86%)
 Frame = -3

Query: 766 TNITKILEKAGQFGTLIRLLKSTSTADQINGQLNNSNNGLTVFAPTDNAFTSLPSGTLNS 587
           TN+TKILEKAGQF   IRLLKST  A+Q+ GQLNNSNNG+TVFAPTDNAF+SL SGTLNS
Sbjct: 38  TNVTKILEKAGQFTLFIRLLKSTQVANQLLGQLNNSNNGMTVFAPTDNAFSSLKSGTLNS 97

Query: 586 LTDQQKVALIQFHVLPNLMTITQFQTASNPLRTQAGDSSDGKYPLNVTAVGNQVNISTGI 407
           LTD+QKV L+QFH++P  +T +QFQT SNPLRTQAGDS DGK+PLN+T  GN VNI+TG+
Sbjct: 98  LTDEQKVELVQFHIVPTYLTSSQFQTISNPLRTQAGDSGDGKFPLNITTSGNSVNITTGL 157

Query: 406 VNTTVSNTIYSDGQLAVYQVDKVLLPLDIFRP 311
            NT+VS TIY+DGQLAVYQ+D+VL PL IF P
Sbjct: 158 TNTSVSGTIYTDGQLAVYQIDQVLQPLQIFAP 189


>ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|118481435|gb|ABK92660.1|
           unknown [Populus trichocarpa]
           gi|222868094|gb|EEF05225.1| predicted protein [Populus
           trichocarpa]
          Length = 239

 Score =  228 bits (582), Expect = 1e-57
 Identities = 111/150 (74%), Positives = 131/150 (87%)
 Frame = -3

Query: 766 TNITKILEKAGQFGTLIRLLKSTSTADQINGQLNNSNNGLTVFAPTDNAFTSLPSGTLNS 587
           TNIT IL KAGQF TLIRLLKST  ADQIN QLNNSN GLTVFAPTDN+F +L +GTLNS
Sbjct: 35  TNITAILAKAGQFTTLIRLLKSTQEADQINTQLNNSNQGLTVFAPTDNSFANLKAGTLNS 94

Query: 586 LTDQQKVALIQFHVLPNLMTITQFQTASNPLRTQAGDSSDGKYPLNVTAVGNQVNISTGI 407
           L+DQQKV L+QFH+LPN ++++ FQT SNPLRTQAG+S+DG++PLNVT  GNQVNI+TG+
Sbjct: 95  LSDQQKVQLVQFHILPNFLSMSNFQTVSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGV 154

Query: 406 VNTTVSNTIYSDGQLAVYQVDKVLLPLDIF 317
              TV+NTIY+DGQL VYQVD+VLLPLD+F
Sbjct: 155 NTATVANTIYTDGQLVVYQVDQVLLPLDLF 184


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