BLASTX nr result

ID: Dioscorea21_contig00025588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025588
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143171.1| PREDICTED: zinc finger HIT domain-containing...   195   4e-48
ref|XP_002283156.1| PREDICTED: uncharacterized protein LOC100245...   192   3e-47
ref|XP_002319400.1| predicted protein [Populus trichocarpa] gi|2...   187   7e-46
ref|XP_003551208.1| PREDICTED: zinc finger HIT domain-containing...   186   2e-45
ref|XP_003538319.1| PREDICTED: zinc finger HIT domain-containing...   182   2e-44

>ref|XP_004143171.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Cucumis sativus] gi|449505173|ref|XP_004162397.1|
           PREDICTED: LOW QUALITY PROTEIN: zinc finger HIT
           domain-containing protein 1 homolog [Cucumis sativus]
          Length = 171

 Score =  195 bits (495), Expect = 4e-48
 Identities = 101/159 (63%), Positives = 116/159 (72%)
 Frame = -3

Query: 479 MEDENTGPFRRTSSRTRKVASKMVAALTSADNRTQAVLARLEALESDNXXXXXXXXXXXX 300
           M+D++T PFRR SSRTRKVA KMVAAL S+DNRTQA LARLEALE+DN            
Sbjct: 1   MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDE 60

Query: 299 XXXXXXXDQVYIXXXXXXXXXXXXXQAKALENAKKAPRTFMELIHDSNLESLPPHVPTYL 120
                  DQ YI              AKALE AKKAP+TFMEL+H++NLESLPPHVP+YL
Sbjct: 61  DASLDDDDQAYIKRQSKGTKRKTRQ-AKALE-AKKAPKTFMELLHEANLESLPPHVPSYL 118

Query: 119 RAAVGPPGSSSRRHFCTVCGFTANYTCVRCGMRFCSCRC 3
           +AAVGPP S+SRRHFCTVCGF A+YTC+RCG+RFCS RC
Sbjct: 119 KAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRC 157


>ref|XP_002283156.1| PREDICTED: uncharacterized protein LOC100245318 [Vitis vinifera]
           gi|297739700|emb|CBI29882.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  192 bits (488), Expect = 3e-47
 Identities = 97/157 (61%), Positives = 111/157 (70%)
 Frame = -3

Query: 473 DENTGPFRRTSSRTRKVASKMVAALTSADNRTQAVLARLEALESDNXXXXXXXXXXXXXX 294
           D+++G  RR S+RTRKVAS+M AAL S DNR QA LARLEALE+DN              
Sbjct: 2   DDDSGSLRRMSTRTRKVASRMAAALASTDNRNQAALARLEALENDNAGMETIDVNDDEDA 61

Query: 293 XXXXXDQVYIXXXXXXXXXXXXXQAKALENAKKAPRTFMELIHDSNLESLPPHVPTYLRA 114
                D+ Y              QAKALENA+KAPRTF+EL+H++NLESLPPHVP+YLRA
Sbjct: 62  SLDDDDEGYAQKRQSKGTKRTTRQAKALENARKAPRTFLELVHEANLESLPPHVPSYLRA 121

Query: 113 AVGPPGSSSRRHFCTVCGFTANYTCVRCGMRFCSCRC 3
           AVGPP S+SRRHFCTVCGF ANYTCVRCG RFCS RC
Sbjct: 122 AVGPPSSTSRRHFCTVCGFAANYTCVRCGTRFCSTRC 158


>ref|XP_002319400.1| predicted protein [Populus trichocarpa] gi|222857776|gb|EEE95323.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  187 bits (476), Expect = 7e-46
 Identities = 95/159 (59%), Positives = 110/159 (69%)
 Frame = -3

Query: 479 MEDENTGPFRRTSSRTRKVASKMVAALTSADNRTQAVLARLEALESDNXXXXXXXXXXXX 300
           MED+ + PFRR S RTRK+A KM AAL S DNRTQA +ARLEALE+D             
Sbjct: 1   MEDDVSNPFRRMSMRTRKIAPKMAAALASNDNRTQAAIARLEALENDYTGMETVEAVDDD 60

Query: 299 XXXXXXXDQVYIXXXXXXXXXXXXXQAKALENAKKAPRTFMELIHDSNLESLPPHVPTYL 120
                  D VYI              AKALENA+KAPR F+EL+H++NLE+LPPHVP+YL
Sbjct: 61  EASLDDDDDVYIQKKQKGTKRKTRQ-AKALENARKAPRNFLELLHEANLEALPPHVPSYL 119

Query: 119 RAAVGPPGSSSRRHFCTVCGFTANYTCVRCGMRFCSCRC 3
           RAAVGPP S+ RRHFCTVCGFT+NYTC +CGMRFCS RC
Sbjct: 120 RAAVGPPSSTCRRHFCTVCGFTSNYTCAKCGMRFCSIRC 158


>ref|XP_003551208.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Glycine max]
          Length = 173

 Score =  186 bits (472), Expect = 2e-45
 Identities = 98/160 (61%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
 Frame = -3

Query: 479 MEDENTGPFRRTSSRTRKVASKMVAALTSADNRTQAVLARLEALESDNXXXXXXXXXXXX 300
           MED+ +   RR SSRTRKVASKM AAL SADNRTQA LARL+ALE+DN            
Sbjct: 1   MEDDGSNSIRRMSSRTRKVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDD 60

Query: 299 XXXXXXXD-QVYIXXXXXXXXXXXXXQAKALENAKKAPRTFMELIHDSNLESLPPHVPTY 123
                  + Q Y+             QAKALE A++APRTF+EL+H++NLESLPPHVP+Y
Sbjct: 61  DDASLDEEDQFYMQKKQSKGTKRKTRQAKALE-ARRAPRTFLELLHEANLESLPPHVPSY 119

Query: 122 LRAAVGPPGSSSRRHFCTVCGFTANYTCVRCGMRFCSCRC 3
            +AAVGPP S+SRRHFCTVCGF+ANYTCVRCGMRFCS RC
Sbjct: 120 WKAAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSHRC 159


>ref|XP_003538319.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Glycine max]
          Length = 173

 Score =  182 bits (463), Expect = 2e-44
 Identities = 98/160 (61%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
 Frame = -3

Query: 479 MEDENTGPFRRTSSRTRKVASKMVAALTSADNRTQAVLARLEALESDNXXXXXXXXXXXX 300
           MED+ +   RR SSRTRKVASKM AAL SADNRTQA LARL+ALE+DN            
Sbjct: 1   MEDDGSNSTRRMSSRTRKVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDD 60

Query: 299 XXXXXXXD-QVYIXXXXXXXXXXXXXQAKALENAKKAPRTFMELIHDSNLESLPPHVPTY 123
                  + Q YI             QAKALE A++APRTF+EL+H++NLESLPPHVP+Y
Sbjct: 61  DDASLDEEDQFYIQKKQSKGTKRKTRQAKALE-ARRAPRTFLELLHEANLESLPPHVPSY 119

Query: 122 LRAAVGPPGSSSRRHFCTVCGFTANYTCVRCGMRFCSCRC 3
            +AAVGPP SSSR HFCTVC F+ANYTCVRCGMRFCS RC
Sbjct: 120 WKAAVGPPSSSSRCHFCTVCAFSANYTCVRCGMRFCSYRC 159


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