BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025447
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC78737.1| hypothetical protein OsI_18944 [Oryza sativa Indi...   257   1e-66
ref|XP_003568817.1| PREDICTED: DNA-directed RNA polymerase II su...   248   8e-64
ref|NP_001054703.1| Os05g0157100 [Oryza sativa Japonica Group] g...   247   2e-63
ref|XP_003568883.1| PREDICTED: DNA-directed RNA polymerase II su...   246   3e-63
dbj|BAK04600.1| predicted protein [Hordeum vulgare subsp. vulgare]    244   2e-62

>gb|EEC78737.1| hypothetical protein OsI_18944 [Oryza sativa Indica Group]
          Length = 175

 Score =  257 bits (657), Expect = 1e-66
 Identities = 124/176 (70%), Positives = 146/176 (82%)
 Frame = -1

Query: 684 MVFLEVEMPWNVLIDPDKLDXXXXXXXXXXXXXXLEDIANRKASKEHGYYVAVTALKKIG 505
           MVFL+V+M WNVLI P +L               LE+IANRKASK+HGYY+AV+ LK I 
Sbjct: 1   MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAIS 60

Query: 504 EGKVREMTGEVLFPVTFTCVTQKPTKGEVLVGTVDKILKQGIFLKSGPLESIFLSEKTMK 325
           EGKVRE+TG+VLFPVTFTC+TQKPTKGE+LVG+VDKILK G+FLKSGP+ESIFLSEKT+ 
Sbjct: 61  EGKVRELTGDVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTLS 120

Query: 324 DYQYSAGDNPMFLNDKHSKLEKDTLVRFKIFGIKWIESDRHFQILATLAGDYLGPL 157
           DY+Y  G+NPMF+ND HSKLEKDT VRFK+ G +W+E+DR FQILATLAGDYLGPL
Sbjct: 121 DYKYIGGENPMFMND-HSKLEKDTAVRFKVMGFRWMEADRQFQILATLAGDYLGPL 175


>ref|XP_003568817.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
           1 [Brachypodium distachyon]
           gi|357134426|ref|XP_003568818.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like isoform 2
           [Brachypodium distachyon]
          Length = 175

 Score =  248 bits (633), Expect = 8e-64
 Identities = 119/176 (67%), Positives = 141/176 (80%)
 Frame = -1

Query: 684 MVFLEVEMPWNVLIDPDKLDXXXXXXXXXXXXXXLEDIANRKASKEHGYYVAVTALKKIG 505
           MVFL  EM WNVLI PD+L               LED+ NRKASKEHGYY+AV  LK+I 
Sbjct: 1   MVFLLTEMSWNVLISPDQLSAKGLLLRKFIIVRLLEDVTNRKASKEHGYYIAVNELKEIS 60

Query: 504 EGKVREMTGEVLFPVTFTCVTQKPTKGEVLVGTVDKILKQGIFLKSGPLESIFLSEKTMK 325
           EGKVRE+TG+VLFPVTFTC+T KP KGE+LVG+VDKILK G+FLKSGP+E+IFLSEKTM 
Sbjct: 61  EGKVRELTGDVLFPVTFTCITLKPMKGEILVGSVDKILKHGMFLKSGPIENIFLSEKTMN 120

Query: 324 DYQYSAGDNPMFLNDKHSKLEKDTLVRFKIFGIKWIESDRHFQILATLAGDYLGPL 157
           DY+Y  G+NPMF+ D HSKLEKDT+VRF++ G +W+E DR FQ+LATLAGD+LGPL
Sbjct: 121 DYKYIGGENPMFMKD-HSKLEKDTIVRFRVMGFRWMEGDRQFQLLATLAGDFLGPL 175


>ref|NP_001054703.1| Os05g0157100 [Oryza sativa Japonica Group]
           gi|45267865|gb|AAS55764.1| putative RNA polymerase II
           [Oryza sativa Japonica Group]
           gi|113578254|dbj|BAF16617.1| Os05g0157100 [Oryza sativa
           Japonica Group] gi|125550915|gb|EAY96624.1| hypothetical
           protein OsI_18537 [Oryza sativa Indica Group]
           gi|215692867|dbj|BAG88287.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222630264|gb|EEE62396.1| hypothetical protein
           OsJ_17187 [Oryza sativa Japonica Group]
          Length = 175

 Score =  247 bits (630), Expect = 2e-63
 Identities = 122/176 (69%), Positives = 144/176 (81%)
 Frame = -1

Query: 684 MVFLEVEMPWNVLIDPDKLDXXXXXXXXXXXXXXLEDIANRKASKEHGYYVAVTALKKIG 505
           MVFL+VEM  NVLI P +L               LEDIANRKASK+HGYY+AV+ LK I 
Sbjct: 1   MVFLKVEMSLNVLISPSQLSPQGLLLRKAVIVRLLEDIANRKASKDHGYYIAVSELKAIS 60

Query: 504 EGKVREMTGEVLFPVTFTCVTQKPTKGEVLVGTVDKILKQGIFLKSGPLESIFLSEKTMK 325
           EGKVRE+TG+VLFPVTFTC+TQKP KGEVLVG+VDKILK GIFLKSGP+ESIFLSEKTM 
Sbjct: 61  EGKVRELTGDVLFPVTFTCITQKPMKGEVLVGSVDKILKHGIFLKSGPIESIFLSEKTMS 120

Query: 324 DYQYSAGDNPMFLNDKHSKLEKDTLVRFKIFGIKWIESDRHFQILATLAGDYLGPL 157
           D++Y  G+N +F+N+ HSKLEKDT+VRFK+ G +W+E+DR FQ+LATLAGDYLGPL
Sbjct: 121 DFKYIGGENAVFMNE-HSKLEKDTVVRFKVMGFRWMEADRQFQLLATLAGDYLGPL 175


>ref|XP_003568883.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Brachypodium distachyon]
          Length = 175

 Score =  246 bits (628), Expect = 3e-63
 Identities = 118/176 (67%), Positives = 142/176 (80%)
 Frame = -1

Query: 684 MVFLEVEMPWNVLIDPDKLDXXXXXXXXXXXXXXLEDIANRKASKEHGYYVAVTALKKIG 505
           MVFL  +M WNVLI PD+L               LEDIANRKASKEHGYY+AV  LK+I 
Sbjct: 1   MVFLLADMSWNVLISPDQLSSKGLLLRKSILVRLLEDIANRKASKEHGYYIAVNELKEIS 60

Query: 504 EGKVREMTGEVLFPVTFTCVTQKPTKGEVLVGTVDKILKQGIFLKSGPLESIFLSEKTMK 325
           EGKVRE+TG+VLFPVTFTC+T KP KGE+LVG+V+KILK G+FLKSGP+E++FLSEKTM 
Sbjct: 61  EGKVRELTGDVLFPVTFTCITLKPMKGEILVGSVEKILKHGVFLKSGPIENVFLSEKTMN 120

Query: 324 DYQYSAGDNPMFLNDKHSKLEKDTLVRFKIFGIKWIESDRHFQILATLAGDYLGPL 157
           DY+Y  G+NPMF+ D HSKLEKDT++RFK  G +W+E+DR FQ+LATLAGD+LGPL
Sbjct: 121 DYKYIGGENPMFMKD-HSKLEKDTVLRFKAMGFRWMEADRQFQLLATLAGDFLGPL 175


>dbj|BAK04600.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 175

 Score =  244 bits (622), Expect = 2e-62
 Identities = 116/176 (65%), Positives = 141/176 (80%)
 Frame = -1

Query: 684 MVFLEVEMPWNVLIDPDKLDXXXXXXXXXXXXXXLEDIANRKASKEHGYYVAVTALKKIG 505
           MVFL+ EM WNVLI PD+L               LEDI NRKAS EHGYY+AV  LK I 
Sbjct: 1   MVFLQEEMSWNVLISPDQLSPKGLLLRKSIIVRLLEDITNRKASNEHGYYIAVNELKTIS 60

Query: 504 EGKVREMTGEVLFPVTFTCVTQKPTKGEVLVGTVDKILKQGIFLKSGPLESIFLSEKTMK 325
           EGKVRE+TG+VLFPVTFTC+TQ+P KGE+LVG+V+KILK G+FLKSGP+ESIFLSEK+M 
Sbjct: 61  EGKVRELTGDVLFPVTFTCITQRPMKGEILVGSVEKILKHGVFLKSGPIESIFLSEKSMS 120

Query: 324 DYQYSAGDNPMFLNDKHSKLEKDTLVRFKIFGIKWIESDRHFQILATLAGDYLGPL 157
           DY+Y  G+NPMF+ D HSKLE+DT VRFK+ G +W+E++R FQ+LA+LAGD+LGPL
Sbjct: 121 DYKYMGGENPMFMKD-HSKLERDTAVRFKVMGFRWMEAERQFQLLASLAGDFLGPL 175