BLASTX nr result

ID: Dioscorea21_contig00025444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025444
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316605.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002518521.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002876246.1| hypothetical protein ARALYDRAFT_485817 [Arab...    64   1e-08
ref|XP_004142665.1| PREDICTED: uncharacterized protein LOC101208...    62   4e-08
ref|XP_002264899.2| PREDICTED: uncharacterized protein LOC100253...    62   4e-08

>ref|XP_002316605.1| predicted protein [Populus trichocarpa] gi|222859670|gb|EEE97217.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/72 (45%), Positives = 51/72 (70%)
 Frame = +3

Query: 6   LQSIDFVILPVLKLDVTIGMEIHIKNPNYVGFSYDNSTALVYYRGSLIADAPVGAGTIGA 185
           L+SI ++I P+  L++T+GM I ++N NY  F Y  STA V YRG+++A+AP+ A TI A
Sbjct: 51  LESIRWIIFPIQMLNITLGMVITVENRNYGSFKYQESTAYVSYRGNVVAEAPIEADTIPA 110

Query: 186 WSKDKLNTSVTI 221
             K  ++T+VT+
Sbjct: 111 RGKHNISTTVTM 122


>ref|XP_002518521.1| conserved hypothetical protein [Ricinus communis]
           gi|223542366|gb|EEF43908.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
 Frame = +3

Query: 24  VILPVLKLDVTIGMEIHIKNPNYVGFSYDNSTALVYYRGSLIADAPVGAGTIGAWSKDKL 203
           V  P L L++T+G+ + I N NY GF Y NSTA V YRG++I +APV A T+ A  K   
Sbjct: 56  VAWPQLFLNITLGVGVIIDNKNYGGFKYSNSTAYVSYRGNVIGEAPVPADTVPARKKHDT 115

Query: 204 NTSVTIV--**FCDEFFLLDRCVLRALEF 284
           +TSVTI     F D+ FL D  ++  L F
Sbjct: 116 STSVTIFANKLFEDDNFLHDFLIVGILNF 144


>ref|XP_002876246.1| hypothetical protein ARALYDRAFT_485817 [Arabidopsis lyrata subsp.
           lyrata] gi|297322084|gb|EFH52505.1| hypothetical protein
           ARALYDRAFT_485817 [Arabidopsis lyrata subsp. lyrata]
          Length = 235

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/71 (42%), Positives = 53/71 (74%)
 Frame = +3

Query: 12  SIDFVILPVLKLDVTIGMEIHIKNPNYVGFSYDNSTALVYYRGSLIADAPVGAGTIGAWS 191
           S++ ++L V+ L++T+ +++ +KNPN VGFSYD+S+AL+ YRG LI +AP+ A  I A  
Sbjct: 97  SVNPLLLKVI-LNLTLNVDLSLKNPNRVGFSYDSSSALLNYRGQLIGEAPLPANRIAARQ 155

Query: 192 KDKLNTSVTIV 224
            + +N ++T++
Sbjct: 156 TEPMNLTLTLM 166


>ref|XP_004142665.1| PREDICTED: uncharacterized protein LOC101208230 [Cucumis sativus]
           gi|449510975|ref|XP_004163827.1| PREDICTED:
           uncharacterized protein LOC101229920 [Cucumis sativus]
          Length = 215

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/60 (48%), Positives = 43/60 (71%)
 Frame = +3

Query: 45  LDVTIGMEIHIKNPNYVGFSYDNSTALVYYRGSLIADAPVGAGTIGAWSKDKLNTSVTIV 224
           ++VT+  +I I NPN VGFSY NSTA + YRG L+ +AP+ AG I A  + ++N ++TI+
Sbjct: 87  INVTLIADIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNITLTIM 146


>ref|XP_002264899.2| PREDICTED: uncharacterized protein LOC100253618 [Vitis vinifera]
          Length = 203

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/74 (36%), Positives = 51/74 (68%)
 Frame = +3

Query: 3   NLQSIDFVILPVLKLDVTIGMEIHIKNPNYVGFSYDNSTALVYYRGSLIADAPVGAGTIG 182
           +L+ +DF + P L ++ ++ + + ++NPN VGF Y+N++AL+ Y GSL+ +AP+ AG IG
Sbjct: 63  SLKDLDFSLTP-LNINASLDVNVSVRNPNRVGFRYNNASALLNYDGSLVGEAPIPAGRIG 121

Query: 183 AWSKDKLNTSVTIV 224
           A     +N  ++++
Sbjct: 122 ARKTTGMNIVISLM 135


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