BLASTX nr result

ID: Dioscorea21_contig00025435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025435
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea ma...   137   6e-53
gb|AFW64904.1| putative regulator of chromosome condensation (RC...   137   6e-53
gb|AFW64901.1| putative regulator of chromosome condensation (RC...   137   6e-53
gb|AFW64902.1| putative regulator of chromosome condensation (RC...   137   6e-53
gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japo...   137   8e-53

>ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
           gi|194695574|gb|ACF81871.1| unknown [Zea mays]
           gi|413924971|gb|AFW64903.1| putative regulator of
           chromosome condensation (RCC1) family protein [Zea mays]
          Length = 418

 Score =  137 bits (345), Expect(2) = 6e-53
 Identities = 69/111 (62%), Positives = 79/111 (71%)
 Frame = -2

Query: 335 EPVEVFGFSEKVVEVSAGYHHSSAITEDGKLFTWGNNSCGQLGLGKRAGSIVSTPTMIDC 156
           EPVE+ GF E+VVEVSAG HHS A+T DGKLF WG NS GQLGLGK AG +VSTPT +DC
Sbjct: 107 EPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDC 166

Query: 155 LADIKVSKVALGSEHSIAITDEGEVLXXXXXXXXXXXXXXXXSFLGFSMIS 3
           L D++V  VALGSEHSIA+T+EGEVL                S LGFS+ S
Sbjct: 167 LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTS 217



 Score = 96.7 bits (239), Expect(2) = 6e-53
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
 Frame = -1

Query: 618 RWLST----SSVPPRRFAALWXXXXXXXXXXXXLESKWRPTVCAFF--QDDDLPVSIACG 457
           RWLS+    S  P +R AALW            LES+W PTVC FF  +  D P S+ACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 456 GAHTLFLTESGRVYASGLNKFGQLGINAGTSHVLHCQCFSG 334
           GAHTLFLT++GRV+A+GLN FGQLGI    +H+L     SG
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISG 113


>gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 263

 Score =  137 bits (345), Expect(2) = 6e-53
 Identities = 69/111 (62%), Positives = 79/111 (71%)
 Frame = -2

Query: 335 EPVEVFGFSEKVVEVSAGYHHSSAITEDGKLFTWGNNSCGQLGLGKRAGSIVSTPTMIDC 156
           EPVE+ GF E+VVEVSAG HHS A+T DGKLF WG NS GQLGLGK AG +VSTPT +DC
Sbjct: 107 EPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDC 166

Query: 155 LADIKVSKVALGSEHSIAITDEGEVLXXXXXXXXXXXXXXXXSFLGFSMIS 3
           L D++V  VALGSEHSIA+T+EGEVL                S LGFS+ S
Sbjct: 167 LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTS 217



 Score = 96.7 bits (239), Expect(2) = 6e-53
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
 Frame = -1

Query: 618 RWLST----SSVPPRRFAALWXXXXXXXXXXXXLESKWRPTVCAFF--QDDDLPVSIACG 457
           RWLS+    S  P +R AALW            LES+W PTVC FF  +  D P S+ACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 456 GAHTLFLTESGRVYASGLNKFGQLGINAGTSHVLHCQCFSG 334
           GAHTLFLT++GRV+A+GLN FGQLGI    +H+L     SG
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISG 113


>gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 263

 Score =  137 bits (345), Expect(2) = 6e-53
 Identities = 69/111 (62%), Positives = 79/111 (71%)
 Frame = -2

Query: 335 EPVEVFGFSEKVVEVSAGYHHSSAITEDGKLFTWGNNSCGQLGLGKRAGSIVSTPTMIDC 156
           EPVE+ GF E+VVEVSAG HHS A+T DGKLF WG NS GQLGLGK AG +VSTPT +DC
Sbjct: 107 EPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDC 166

Query: 155 LADIKVSKVALGSEHSIAITDEGEVLXXXXXXXXXXXXXXXXSFLGFSMIS 3
           L D++V  VALGSEHSIA+T+EGEVL                S LGFS+ S
Sbjct: 167 LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTS 217



 Score = 96.7 bits (239), Expect(2) = 6e-53
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
 Frame = -1

Query: 618 RWLST----SSVPPRRFAALWXXXXXXXXXXXXLESKWRPTVCAFF--QDDDLPVSIACG 457
           RWLS+    S  P +R AALW            LES+W PTVC FF  +  D P S+ACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 456 GAHTLFLTESGRVYASGLNKFGQLGINAGTSHVLHCQCFSG 334
           GAHTLFLT++GRV+A+GLN FGQLGI    +H+L     SG
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISG 113


>gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 261

 Score =  137 bits (345), Expect(2) = 6e-53
 Identities = 69/111 (62%), Positives = 79/111 (71%)
 Frame = -2

Query: 335 EPVEVFGFSEKVVEVSAGYHHSSAITEDGKLFTWGNNSCGQLGLGKRAGSIVSTPTMIDC 156
           EPVE+ GF E+VVEVSAG HHS A+T DGKLF WG NS GQLGLGK AG +VSTPT +DC
Sbjct: 107 EPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDC 166

Query: 155 LADIKVSKVALGSEHSIAITDEGEVLXXXXXXXXXXXXXXXXSFLGFSMIS 3
           L D++V  VALGSEHSIA+T+EGEVL                S LGFS+ S
Sbjct: 167 LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTS 217



 Score = 96.7 bits (239), Expect(2) = 6e-53
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
 Frame = -1

Query: 618 RWLST----SSVPPRRFAALWXXXXXXXXXXXXLESKWRPTVCAFF--QDDDLPVSIACG 457
           RWLS+    S  P +R AALW            LES+W PTVC FF  +  D P S+ACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 456 GAHTLFLTESGRVYASGLNKFGQLGINAGTSHVLHCQCFSG 334
           GAHTLFLT++GRV+A+GLN FGQLGI    +H+L     SG
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISG 113


>gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  137 bits (345), Expect(2) = 8e-53
 Identities = 70/109 (64%), Positives = 77/109 (70%)
 Frame = -2

Query: 335 EPVEVFGFSEKVVEVSAGYHHSSAITEDGKLFTWGNNSCGQLGLGKRAGSIVSTPTMIDC 156
           EP+EV GF EKVVEVSAG HHS A+T DGKLF WG NS GQLGLGKRAG +VSTP  +DC
Sbjct: 116 EPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDC 175

Query: 155 LADIKVSKVALGSEHSIAITDEGEVLXXXXXXXXXXXXXXXXSFLGFSM 9
           LAD +V  VALGSEHSIA T+EGEVL                S LGFS+
Sbjct: 176 LADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSI 224



 Score = 96.3 bits (238), Expect(2) = 8e-53
 Identities = 53/101 (52%), Positives = 61/101 (60%), Gaps = 9/101 (8%)
 Frame = -1

Query: 630 RAGARWLSTS--SVPPRRFAALWXXXXXXXXXXXXLESKWRPTVCAFF-------QDDDL 478
           R  AR LS+   +   RR AALW            LES+W PT C FF        DDD 
Sbjct: 15  RRAARMLSSGEPAAGRRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDP 74

Query: 477 PVSIACGGAHTLFLTESGRVYASGLNKFGQLGINAGTSHVL 355
           P S+ACGGAHTLFLTESGRV+A+GLN FGQLGI +  +H L
Sbjct: 75  PASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSL 115


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