BLASTX nr result

ID: Dioscorea21_contig00025424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025424
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...    92   3e-17
emb|CBI28440.3| unnamed protein product [Vitis vinifera]               92   4e-17
emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]    92   4e-17
ref|XP_002530218.1| conserved hypothetical protein [Ricinus comm...    89   5e-16
ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/108 (44%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
 Frame = -2

Query: 424  FESSGIPCRHALRVLSLKNFFSVPEKYLLVRWRKESSLF------PKSNGYKYRSQALRS 263
            FE SG+ CRH+LR+L +KN+F +P+KY  +RWRKESSL        +SN  +  SQA  S
Sbjct: 1627 FEHSGLLCRHSLRLLVVKNYFQLPDKYFPLRWRKESSLITMDDHNTQSNSDEC-SQAFHS 1685

Query: 262  LASIIVQEASITKDRFDYIQWHLGRLLAYVRDMPATDEGASNLDPSTL 119
            LA+ ++ E+ ++K+RF+Y+   L  LL +VR+MP  DE + N+ P+ +
Sbjct: 1686 LAATLLTESLVSKERFNYVHKELTGLLDHVRNMPVVDEVSLNMAPNNV 1733


>emb|CBI28440.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/106 (45%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
 Frame = -2

Query: 424 FESSGIPCRHALRVLSLKNFFSVPEKYLLVRWRKESSLF------PKSNGYKYRSQALRS 263
           FE SG+ CRH+LR+L +KN+F +P+KY  +RWRKESSL        +SN  +  SQA  S
Sbjct: 583 FEHSGLLCRHSLRLLVVKNYFQLPDKYFPLRWRKESSLITMDDHNTQSNSDEC-SQAFHS 641

Query: 262 LASIIVQEASITKDRFDYIQWHLGRLLAYVRDMPATDEGASNLDPS 125
           LA+ ++ E+ ++K+RF+Y+   L  LL +VR+MP  DE + N+ P+
Sbjct: 642 LAATLLTESLVSKERFNYVHKELTGLLDHVRNMPVVDEVSLNMAPN 687


>emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]
          Length = 692

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/108 (44%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
 Frame = -2

Query: 424 FESSGIPCRHALRVLSLKNFFSVPEKYLLVRWRKESSLF------PKSNGYKYRSQALRS 263
           FE SG+ CRH+LR+L +KN+F +P+KY  +RWRKESSL        +SN  +  SQA  S
Sbjct: 583 FEHSGLLCRHSLRLLVVKNYFQLPDKYFPLRWRKESSLITMDDHNTQSNSDEC-SQAFHS 641

Query: 262 LASIIVQEASITKDRFDYIQWHLGRLLAYVRDMPATDEGASNLDPSTL 119
           LA+ ++ E+ ++K+RF+Y+   L  LL +VR+MP  DE + N+ P+ +
Sbjct: 642 LAATLLTESLVSKERFNYVHKELTGLLDHVRNMPVIDEVSLNMAPNNV 689


>ref|XP_002530218.1| conserved hypothetical protein [Ricinus communis]
           gi|223530265|gb|EEF32165.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 651

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 6/98 (6%)
 Frame = -2

Query: 424 FESSGIPCRHALRVLSLKNFFSVPEKYLLVRWRKESSLF------PKSNGYKYRSQALRS 263
           FE SGI CRH+LRVL++KN+F +PEK+  +RWR+E SL        +SNG +  +QA  S
Sbjct: 542 FEHSGILCRHSLRVLAVKNYFQLPEKFYPLRWRREHSLVAMDDQNAQSNGNEC-AQAFHS 600

Query: 262 LASIIVQEASITKDRFDYIQWHLGRLLAYVRDMPATDE 149
           LAS ++ EA  +K+RF Y+   L  LL +VR MP T+E
Sbjct: 601 LASTLLTEALASKERFTYVHRELTGLLDHVRSMPVTEE 638


>ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|222861970|gb|EEE99512.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/108 (41%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
 Frame = -2

Query: 424 FESSGIPCRHALRVLSLKNFFSVPEKYLLVRWRKESSLFP------KSNGYKYRSQALRS 263
           FE SGI CRH+LR+L +KN+F +PE+Y  +RWR++ SL P      +SN  +  +QA  +
Sbjct: 577 FEHSGILCRHSLRLLEVKNYFQLPERYFPLRWRRDQSLVPMDDQNAQSNNDEC-AQAFHA 635

Query: 262 LASIIVQEASITKDRFDYIQWHLGRLLAYVRDMPATDEGASNLDPSTL 119
           LA  ++ E+ I+K+RF+++Q  +  LLA VR MP  +E + N+ P+ +
Sbjct: 636 LAEALLTESLISKERFNHVQREITGLLAEVRSMPVAEELSLNIPPNNV 683