BLASTX nr result
ID: Dioscorea21_contig00025422
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00025422
(517 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat... 195 4e-48
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera] 194 5e-48
ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|2... 192 2e-47
ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat... 188 3e-46
ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat... 188 3e-46
>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 195 bits (495), Expect = 4e-48
Identities = 97/170 (57%), Positives = 127/170 (74%)
Frame = +2
Query: 8 YGVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGH 187
+G+ PD+YT+PC LKA S S +L G+QIHA+V + GLD N+FVGN LI+MY +CG
Sbjct: 131 HGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVE 190
Query: 188 ACQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMMVELNEPRPDSGTMASILPAV 367
AC+V D M RDVVSWN+L+AG A+NGQF+ AL+ KEM EL +PD+GTMAS+LPAV
Sbjct: 191 ACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM--ELLGLKPDAGTMASLLPAV 248
Query: 368 LSTDSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRME 517
+T NV FV+ +F ++ K LVSWN MIA+Y NNSM AEAV+++ +ME
Sbjct: 249 TNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 298
Score = 77.8 bits (190), Expect = 8e-13
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 8 YGVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGH 187
+ V PD + L AC L G +IH V + L NL + NALI MYA+CG +
Sbjct: 300 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 359
Query: 188 ACQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMM-VELNEPRPDSGTMASILPA 364
A +VFD M RDVVSW ++I+ Y NG+ A+ M + LN PDS S+L A
Sbjct: 360 AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN---PDSIAFVSVLSA 416
>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 194 bits (494), Expect = 5e-48
Identities = 97/170 (57%), Positives = 127/170 (74%)
Frame = +2
Query: 8 YGVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGH 187
+G+ PD+YT+PC LKA S S +L G+QIHA+V + GLD N+FVGN LI+MY +CG
Sbjct: 1120 HGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVE 1179
Query: 188 ACQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMMVELNEPRPDSGTMASILPAV 367
AC+V D M RDVVSWN+L+AG A+NGQF+ AL+ KEM EL +PD+GTMAS+LPAV
Sbjct: 1180 ACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM--ELLGLKPDAGTMASLLPAV 1237
Query: 368 LSTDSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRME 517
+T NV FV+ +F ++ K LVSWN MIA+Y NNSM AEAV+++ +ME
Sbjct: 1238 TNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 1287
Score = 77.8 bits (190), Expect = 8e-13
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 8 YGVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGH 187
+ V PD + L AC L G +IH V + L NL + NALI MYA+CG +
Sbjct: 1289 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 1348
Query: 188 ACQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMM-VELNEPRPDSGTMASILPA 364
A +VFD M RDVVSW ++I+ Y NG+ A+ M + LN PDS S+L A
Sbjct: 1349 AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN---PDSIAFVSVLSA 1405
>ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|222871435|gb|EEF08566.1|
predicted protein [Populus trichocarpa]
Length = 677
Score = 192 bits (488), Expect = 2e-47
Identities = 92/169 (54%), Positives = 124/169 (73%)
Frame = +2
Query: 11 GVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGHA 190
G PDNYT+PC LKACS SGNL GLQIH +V K GLD NL++GN L++MY +C A
Sbjct: 132 GFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAA 191
Query: 191 CQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMMVELNEPRPDSGTMASILPAVL 370
+V D M RD+VSWN+++AGYAQNG+F ALK +EM E + +PD+GTM S+LPAV
Sbjct: 192 RRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREM--EDLKLKPDAGTMGSLLPAVT 249
Query: 371 STDSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRME 517
+T NV++V+++F ++ K L+SWN MIA+Y NN+M EAV+LY +M+
Sbjct: 250 NTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQ 298
Score = 78.6 bits (192), Expect = 5e-13
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Frame = +2
Query: 8 YGVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGH 187
+GV+PD + L AC G +IH V + L NL + NALI MYA+CG
Sbjct: 300 HGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKE 359
Query: 188 ACQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMMVELNEPRPDSGTMASILPAV 367
A VFD M RDVVSW ++I+ Y +GQ + A+ K+M + PD S+L A
Sbjct: 360 ARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKM--RDSGFTPDWIAFVSVLAA- 416
Query: 368 LSTDSSNVVFVRNVFDQM----VVKGLVSWNAMIAIYANNSMSAEAVELYRRM 514
+ + V R F+ M + G+ +N M+ + EA L R+M
Sbjct: 417 -CSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQM 468
>ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 188 bits (478), Expect = 3e-46
Identities = 94/167 (56%), Positives = 119/167 (71%), Gaps = 1/167 (0%)
Frame = +2
Query: 20 PDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGHACQV 199
PD+YTFPC LKACS NL GLQ+H ++ K GLDTNLF+GNAL+ MY +CG A +V
Sbjct: 135 PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKV 194
Query: 200 FDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEM-MVELNEPRPDSGTMASILPAVLST 376
D M RDVVSWN+++AGYAQ+GQF+ AL+ KEM + LN D+GTMAS+ P V T
Sbjct: 195 LDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNH---DAGTMASLSPVVCYT 251
Query: 377 DSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRME 517
NV ++ N+F++M K L+SWN MIAIY NNSM EAV L+ +ME
Sbjct: 252 SLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME 298
Score = 77.4 bits (189), Expect = 1e-12
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Frame = +2
Query: 11 GVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGHA 190
G++PD T L AC L G ++H + K L NL + NAL+ MYA+CG A
Sbjct: 301 GMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEA 360
Query: 191 CQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMMVELNEPRPDSGTMASILPAVL 370
VFD M RDVVSW ++++ Y ++GQ A+ +M+ + PDS S+L A
Sbjct: 361 RDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD--SGQNPDSIAFVSVLSACS 418
Query: 371 ST---DSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRM 514
T D F +V + + M+ ++ EA ++M
Sbjct: 419 HTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 469
>ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 188 bits (478), Expect = 3e-46
Identities = 94/167 (56%), Positives = 119/167 (71%), Gaps = 1/167 (0%)
Frame = +2
Query: 20 PDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGHACQV 199
PD+YTFPC LKACS NL GLQ+H ++ K GLDTNLF+GNAL+ MY +CG A +V
Sbjct: 135 PDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKV 194
Query: 200 FDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEM-MVELNEPRPDSGTMASILPAVLST 376
D M RDVVSWN+++AGYAQ+GQF+ AL+ KEM + LN D+GTMAS+ P V T
Sbjct: 195 LDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNH---DAGTMASLSPVVCYT 251
Query: 377 DSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRME 517
NV ++ N+F++M K L+SWN MIAIY NNSM EAV L+ +ME
Sbjct: 252 SLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME 298
Score = 76.6 bits (187), Expect = 2e-12
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Frame = +2
Query: 11 GVQPDNYTFPCALKACSASGNLCGGLQIHASVSKFGLDTNLFVGNALITMYARCGRSGHA 190
G++PD T L AC L G ++H + K L NL + NAL+ MYA+CG A
Sbjct: 301 GMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEA 360
Query: 191 CQVFDLMTDRDVVSWNALIAGYAQNGQFEQALKALKEMMVELNEPRPDSGTMASILPAVL 370
VFD M RDVVSW ++++ Y ++GQ A+ +M+ + PDS S+L A
Sbjct: 361 RDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD--SGQNPDSIAFVSVLSACS 418
Query: 371 ST---DSSNVVFVRNVFDQMVVKGLVSWNAMIAIYANNSMSAEAVELYRRM 514
T D F +V + + M+ ++ EA ++M
Sbjct: 419 HTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 469