BLASTX nr result

ID: Dioscorea21_contig00025421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025421
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG57911.1| transcription factor [Lycoris longituba]                82   4e-14
ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002331457.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CAA43111.1| DNA-binding protein [Petunia x hybrida]                76   3e-12
emb|CAE02950.1| OSJNBb0050N09.1 [Oryza sativa Japonica Group] gi...    74   1e-11

>gb|ADG57911.1| transcription factor [Lycoris longituba]
          Length = 82

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/61 (68%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
 Frame = -1

Query: 166 DMANCLILLAQGG-RAEVKPEKFTSRKF-----TDGKAAGFCVYECKTCNKCFPSFQALG 5
           DMA+CLILLA GG R+   PEKFTSR+F     T G  AGF VYECKTCNKC P+FQALG
Sbjct: 21  DMAHCLILLAHGGARSAASPEKFTSRRFNETATTAGGKAGFYVYECKTCNKCLPTFQALG 80

Query: 4   G 2
           G
Sbjct: 81  G 81


>ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|222849952|gb|EEE87499.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/68 (61%), Positives = 46/68 (67%), Gaps = 13/68 (19%)
 Frame = -1

Query: 166 DMANCLILLAQGG--------RAEVKPEKFTSRKFTDGKA-----AGFCVYECKTCNKCF 26
           DMANCLILLAQG             K EKF++RKF+D  A     AGF VYECKTCN+CF
Sbjct: 80  DMANCLILLAQGDVPPKQIHENKGSKVEKFSARKFSDMSAPTINKAGFFVYECKTCNRCF 139

Query: 25  PSFQALGG 2
           PSFQALGG
Sbjct: 140 PSFQALGG 147


>ref|XP_002331457.1| predicted protein [Populus trichocarpa] gi|222873535|gb|EEF10666.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 52/108 (48%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
 Frame = -1

Query: 286 LLPIIKGKRTKRHRXXXXXXXXXXXXXXXXXXXXXXXXXE-DMANCLILLAQGGRAEV-- 116
           L  IIKGKRTKR R                         E DMANCLILLAQG R +   
Sbjct: 13  LTQIIKGKRTKRQRSSSPYMHGSISSPTTSSEVTERTEEEEDMANCLILLAQGDRPKQIH 72

Query: 115 -----KPEKFTSRKFTDGKA-----AGFCVYECKTCNKCFPSFQALGG 2
                K EKF +RK +D        AGF VYECKTCN+ FPSFQALGG
Sbjct: 73  ENKSGKVEKFRARKSSDMSTPTINKAGFLVYECKTCNRSFPSFQALGG 120


>emb|CAA43111.1| DNA-binding protein [Petunia x hybrida]
          Length = 281

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 5/60 (8%)
 Frame = -1

Query: 166 DMANCLILLAQGGRAEVKPEKFTSRKFTD-----GKAAGFCVYECKTCNKCFPSFQALGG 2
           DMANCLILLAQ G++    +KF+SRKFT+     GKA GF VYECKTCN+ FPSFQALGG
Sbjct: 51  DMANCLILLAQSGQSH--KQKFSSRKFTETATSTGKA-GFYVYECKTCNRTFPSFQALGG 107


>emb|CAE02950.1| OSJNBb0050N09.1 [Oryza sativa Japonica Group]
           gi|38345645|emb|CAE01875.2| OSJNBb0028M18.8 [Oryza
           sativa Japonica Group] gi|125589347|gb|EAZ29697.1|
           hypothetical protein OsJ_13762 [Oryza sativa Japonica
           Group]
          Length = 342

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 9/64 (14%)
 Frame = -1

Query: 166 DMANCLILLAQGGRAEVKPE---------KFTSRKFTDGKAAGFCVYECKTCNKCFPSFQ 14
           DMA CL+LLA GG  E  P+         KF SR+  DG  AG  VYECKTC+KCFPSFQ
Sbjct: 86  DMALCLMLLASGGHGERAPDAEAVAAKEAKFRSRRPADGAGAGEFVYECKTCSKCFPSFQ 145

Query: 13  ALGG 2
           ALGG
Sbjct: 146 ALGG 149


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