BLASTX nr result

ID: Dioscorea21_contig00025420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025420
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21466.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002281300.1| PREDICTED: uncharacterized protein LOC100262...    75   6e-12
emb|CAX32464.1| MADS-box protein agl66, partial [Eschscholzia ca...    64   1e-08
emb|CAX16992.1| AGL66 protein [Eschscholzia californica]               64   1e-08
ref|XP_002513872.1| mads box protein, putative [Ricinus communis...    58   7e-07

>emb|CBI21466.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = +2

Query: 14  ISQGTSLQMDP-QMGGCHISNQSDNNLPAWHQAYTSTELLSNLIAANNPFPLLQQHMATA 190
           +  GTS+ +DP  MGGCHISN     LP WH +YTSTELLS L+   +  P   +    +
Sbjct: 239 LGHGTSINVDPINMGGCHISNSGCEGLPPWHHSYTSTELLSALMPQPSYPPPKHEMAPGS 298

Query: 191 DLPTIVPHEQVEHTTSYSHV-QGETD 265
            +PT++PH+Q+E T++  H+  GE D
Sbjct: 299 IIPTMMPHQQMEATSNCQHLPSGEDD 324


>ref|XP_002281300.1| PREDICTED: uncharacterized protein LOC100262908 [Vitis vinifera]
          Length = 134

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = +2

Query: 14  ISQGTSLQMDP-QMGGCHISNQSDNNLPAWHQAYTSTELLSNLIAANNPFPLLQQHMATA 190
           +  GTS+ +DP  MGGCHISN     LP WH +YTSTELLS L+   +  P   +    +
Sbjct: 35  LGHGTSINVDPINMGGCHISNSGCEGLPPWHHSYTSTELLSALMPQPSYPPPKHEMAPGS 94

Query: 191 DLPTIVPHEQVEHTTSYSHV-QGETD 265
            +PT++PH+Q+E T++  H+  GE D
Sbjct: 95  IIPTMMPHQQMEATSNCQHLPSGEDD 120


>emb|CAX32464.1| MADS-box protein agl66, partial [Eschscholzia californica]
          Length = 203

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +2

Query: 2   YAHQISQGTSLQMDPQ-MGGCHISNQSDNNLPAWHQAYTSTELLSNLIAANNPFPLLQQH 178
           +  Q+  G+SL +DP+ MG CH++NQ++ NLP W+Q YTS EL S L+ ++  F L+Q  
Sbjct: 93  FHEQLQHGSSLNVDPRSMGECHVNNQTEGNLPPWNQTYTSAELFSTLLPSS--FSLIQHD 150

Query: 179 --MATADLPTIVPHEQVEHTTSYSHVQ 253
             + +   P +  HEQVE   + S  Q
Sbjct: 151 GLVGSNMQPIMQQHEQVETPINCSQGQ 177


>emb|CAX16992.1| AGL66 protein [Eschscholzia californica]
          Length = 348

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +2

Query: 2   YAHQISQGTSLQMDPQ-MGGCHISNQSDNNLPAWHQAYTSTELLSNLIAANNPFPLLQQH 178
           +  Q+  G+SL +DP+ MG CH++NQ++ NLP W+Q YTS EL S L+ ++  F L+Q  
Sbjct: 238 FHEQLQHGSSLNVDPRSMGECHVNNQTEGNLPPWNQTYTSAELFSTLLPSS--FSLIQHD 295

Query: 179 --MATADLPTIVPHEQVEHTTSYSHVQ 253
             + +   P +  HEQVE   + S  Q
Sbjct: 296 GLVGSNMQPMMQQHEQVETPINCSQGQ 322


>ref|XP_002513872.1| mads box protein, putative [Ricinus communis]
           gi|223546958|gb|EEF48455.1| mads box protein, putative
           [Ricinus communis]
          Length = 347

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = +2

Query: 47  QMGGCHISNQSDNNLPAWHQAYTSTELLSNLIAANNPFPLLQQHMATADLPTIVPHEQVE 226
           +MG CH++N +D N   W Q YTST L S  I+++     LQ  M   ++P ++P EQ+E
Sbjct: 261 RMGECHVTNPNDGNFSPWPQLYTSTGLNSTAISSSLYPHQLQHGMVGPNIPDMMPREQME 320

Query: 227 HTTSYSHVQGETDGTCTTTYEGNSGSQVNG 316
                 HV  E        YE N   ++NG
Sbjct: 321 IPMDAEHVHME---NVAANYENNKVPRLNG 347


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