BLASTX nr result

ID: Dioscorea21_contig00025391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025391
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274591.1| PREDICTED: beta-xylosidase/alpha-L-arabinofu...    94   1e-29
emb|CAN72807.1| hypothetical protein VITISV_033721 [Vitis vinifera]    94   1e-29
ref|XP_002309869.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-28
ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like...   100   3e-28
ref|XP_002274619.1| PREDICTED: probable beta-D-xylosidase 5-like...    83   6e-26

>ref|XP_002274591.1| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like
           [Vitis vinifera]
          Length = 805

 Score = 93.6 bits (231), Expect(2) = 1e-29
 Identities = 39/66 (59%), Positives = 52/66 (78%)
 Frame = -2

Query: 200 QETPGEDSFVVARYAVNFVRGMQDVQGQKDPPDLNERLLKVSTCCKHFGAYDVDNWFGET 21
           QET GED F+V  +AVN+VRG+QDV+G ++  DLN R LKVS+CCKH+ AYD+D+W    
Sbjct: 193 QETSGEDPFIVGEFAVNYVRGLQDVEGTENVTDLNSRPLKVSSCCKHYAAYDIDSWLNVD 252

Query: 20  RYTFDS 3
           R+TFD+
Sbjct: 253 RHTFDA 258



 Score = 61.2 bits (147), Expect(2) = 1e-29
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -1

Query: 282 QVISTEGRAMYNLGHSQLTFWAPNINLARDTRRG 181
           +V+STEGRAMYNLGH+ LTFW+PNIN+ RDTR G
Sbjct: 157 RVVSTEGRAMYNLGHAGLTFWSPNINVVRDTRWG 190


>emb|CAN72807.1| hypothetical protein VITISV_033721 [Vitis vinifera]
          Length = 236

 Score = 93.6 bits (231), Expect(2) = 1e-29
 Identities = 39/66 (59%), Positives = 52/66 (78%)
 Frame = -2

Query: 200 QETPGEDSFVVARYAVNFVRGMQDVQGQKDPPDLNERLLKVSTCCKHFGAYDVDNWFGET 21
           QET GED F+V  +AVN+VRG+QDV+G ++  DLN R LKVS+CCKH+ AYD+D+W    
Sbjct: 163 QETSGEDPFIVGEFAVNYVRGLQDVEGTENVTDLNSRPLKVSSCCKHYAAYDIDSWLNVD 222

Query: 20  RYTFDS 3
           R+TFD+
Sbjct: 223 RHTFDA 228



 Score = 61.2 bits (147), Expect(2) = 1e-29
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -1

Query: 282 QVISTEGRAMYNLGHSQLTFWAPNINLARDTRRG 181
           +V+STEGRAMYNLGH+ LTFW+PNIN+ RDTR G
Sbjct: 127 RVVSTEGRAMYNLGHAGLTFWSPNINVVRDTRWG 160


>ref|XP_002309869.1| predicted protein [Populus trichocarpa] gi|222852772|gb|EEE90319.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score = 99.0 bits (245), Expect(2) = 1e-28
 Identities = 43/65 (66%), Positives = 53/65 (81%)
 Frame = -2

Query: 197 ETPGEDSFVVARYAVNFVRGMQDVQGQKDPPDLNERLLKVSTCCKHFGAYDVDNWFGETR 18
           ETPGED ++V RYAVN+VRG+QDV+G ++  D N R LKVS+CCKH+ AYDVDNW G  R
Sbjct: 117 ETPGEDPYLVGRYAVNYVRGLQDVEGSENYTDPNSRPLKVSSCCKHYAAYDVDNWKGVER 176

Query: 17  YTFDS 3
           YTFD+
Sbjct: 177 YTFDA 181



 Score = 52.4 bits (124), Expect(2) = 1e-28
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -1

Query: 282 QVISTEGRAMYNLGHSQLTFWAPNINLARDTRRG 181
           Q +STE RAMYNLG + LT+W+PNIN+ RD R G
Sbjct: 80  QAVSTEARAMYNLGRAGLTYWSPNINVVRDPRWG 113


>ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus]
           gi|449530107|ref|XP_004172038.1| PREDICTED: probable
           beta-D-xylosidase 2-like [Cucumis sativus]
          Length = 812

 Score =  100 bits (249), Expect(2) = 3e-28
 Identities = 43/65 (66%), Positives = 53/65 (81%)
 Frame = -2

Query: 197 ETPGEDSFVVARYAVNFVRGMQDVQGQKDPPDLNERLLKVSTCCKHFGAYDVDNWFGETR 18
           ETPGED FVV +YA N+VRG+QDV+G ++  DLN R LKVS+CCKH+ AYDVDNW G  R
Sbjct: 203 ETPGEDPFVVGKYAKNYVRGLQDVEGSENVTDLNSRPLKVSSCCKHYAAYDVDNWLGVER 262

Query: 17  YTFDS 3
           Y+FD+
Sbjct: 263 YSFDA 267



 Score = 49.7 bits (117), Expect(2) = 3e-28
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = -1

Query: 282 QVISTEGRAMYNLGHSQLTFWAPNINLARDTRRG 181
           Q +STE RAMYNLG + LT+W+P IN+ RD R G
Sbjct: 166 QAVSTEARAMYNLGRAGLTYWSPTINVIRDPRWG 199


>ref|XP_002274619.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera]
          Length = 805

 Score = 82.8 bits (203), Expect(2) = 6e-26
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = -2

Query: 197 ETPGEDSFVVARYAVNFVRGMQDVQGQKDPPDLNERLLKVSTCCKHFGAYDVDNWFGETR 18
           ETPGED   V  Y VN+VRG+QD++G ++  DLN R LK+++ CKHF AYD+D WF   R
Sbjct: 195 ETPGEDPLTVGVYGVNYVRGLQDIEGTENTTDLNSRPLKIASSCKHFAAYDLDQWFNVDR 254

Query: 17  YTFDS 3
             FD+
Sbjct: 255 RHFDA 259



 Score = 59.7 bits (143), Expect(2) = 6e-26
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 282 QVISTEGRAMYNLGHSQLTFWAPNINLARDTRRG 181
           QV+STE RAMYNLGH+ LTFW+PNIN+ARD R G
Sbjct: 158 QVVSTEARAMYNLGHAGLTFWSPNINVARDPRWG 191


Top