BLASTX nr result

ID: Dioscorea21_contig00025383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025383
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   116   2e-24
dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]    115   3e-24
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002334259.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
tpg|DAA60446.1| TPA: putative RING zinc finger and ankyrin repea...   113   1e-23

>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = -1

Query: 297 INSTVFYNNSINYPSVDSRPTNVNASPFDTRPDIIXXXXXXXXS--CVICLDGPVEGACI 124
           I   V  +  + YPS+DS P ++ +  F+T             +  CVICLD P+EGACI
Sbjct: 403 IADEVVDDGPVQYPSIDSSPVDLTSPAFETSAAASEQSKEGGAASSCVICLDAPIEGACI 462

Query: 123 PCGHMAGCMSCLNEIKTKQWGCPICRTQIQQVIKLYAV 10
           PCGHMAGCMSCLNEIK K+WGCP+CR +I QV+KLY+V
Sbjct: 463 PCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


>dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 13/104 (12%)
 Frame = -1

Query: 282 FYNNSINYPSVDSRPTNV-------------NASPFDTRPDIIXXXXXXXXSCVICLDGP 142
           FY+  I YPS+D  P +V             +A P +   D          +CVICLD P
Sbjct: 336 FYDGPIEYPSIDFTPVDVTMPATEGGGTALNSAKPVENEADASSSGNTPSGTCVICLDAP 395

Query: 141 VEGACIPCGHMAGCMSCLNEIKTKQWGCPICRTQIQQVIKLYAV 10
           VEGACIPCGHMAGCMSCL +I++K+WGCPICR +I Q+I+LYAV
Sbjct: 396 VEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 439


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
 Frame = -1

Query: 267 INYPSVDSRPTNVNASPFDTRPDIIXXXXXXXXS--CVICLDGPVEGACIPCGHMAGCMS 94
           I+YPS+DS P ++++ P +  P+          S  CVICLD PVEGACIPCGHM GCMS
Sbjct: 357 IHYPSIDSSPLDISSLPIENLPENTGEKKEDGGSSSCVICLDAPVEGACIPCGHMVGCMS 416

Query: 93  CLNEIKTKQWGCPICRTQIQQVIKLYAV 10
           CL EIK K+WGCP+CR  I QV++LYAV
Sbjct: 417 CLKEIKAKKWGCPVCRATINQVVRLYAV 444


>ref|XP_002334259.1| predicted protein [Populus trichocarpa] gi|222870334|gb|EEF07465.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
 Frame = -1

Query: 267 INYPSVDSRPTNVNASPFDTRPDIIXXXXXXXXS--CVICLDGPVEGACIPCGHMAGCMS 94
           I+YPS+DS P + ++ P +  P+          S  CVICLD PVEGACIPCGHM GCMS
Sbjct: 368 IHYPSIDSSPLDFSSLPLENLPENTGEKKEDGDSSSCVICLDAPVEGACIPCGHMVGCMS 427

Query: 93  CLNEIKTKQWGCPICRTQIQQVIKLYAV 10
           CL EIK K+WGCP+CR  I QV++LYAV
Sbjct: 428 CLKEIKAKEWGCPVCRATINQVVRLYAV 455


>tpg|DAA60446.1| TPA: putative RING zinc finger and ankyrin repeat containing
           protein [Zea mays]
          Length = 334

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 18/109 (16%)
 Frame = -1

Query: 282 FYNNSINYPSVDSRPTNVN---------------ASP---FDTRPDIIXXXXXXXXSCVI 157
           FYN  ++YPS+DS P +V                A+P    +   D          +CVI
Sbjct: 226 FYNGPVHYPSIDSTPVDVTMPATTGGGSTTVIATAAPTEQLENEADASDSGKTPSGTCVI 285

Query: 156 CLDGPVEGACIPCGHMAGCMSCLNEIKTKQWGCPICRTQIQQVIKLYAV 10
           CLD PVEGACIPCGHMAGCMSCL +I++K+WGCPICR  I QV++LYAV
Sbjct: 286 CLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRATINQVVRLYAV 334


Top