BLASTX nr result
ID: Dioscorea21_contig00025380
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00025380 (653 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514989.1| conserved hypothetical protein [Ricinus comm... 124 2e-26 ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|2... 117 2e-24 ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|2... 117 2e-24 ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853... 113 4e-23 ref|NP_001149742.1| DNA binding protein [Zea mays] gi|195630481|... 99 9e-19 >ref|XP_002514989.1| conserved hypothetical protein [Ricinus communis] gi|223546040|gb|EEF47543.1| conserved hypothetical protein [Ricinus communis] Length = 358 Score = 124 bits (311), Expect = 2e-26 Identities = 79/172 (45%), Positives = 97/172 (56%), Gaps = 6/172 (3%) Frame = -3 Query: 498 MMSGEEKACYEIGSAAQENQSTTNSYTFEFHXXXXXXXXXXXK-----PTPSKWDDAQKW 334 M S E+K CY G + ST++ +FEFH + PTPSKWDDAQKW Sbjct: 1 MRSIEDKGCYNHGPI--QEISTSHGISFEFHKGNGANRTSHHRTALGKPTPSKWDDAQKW 58 Query: 333 LVGLSTSRDXXXXXXXXXXXXXXXXXNADDRRLLSSQSQKGRDSCSSLDGILGDYSSVPI 154 LVGLS D NADDRRL++ Q+ RD S D + G+ Sbjct: 59 LVGLSRGGD--------KNQSKPRNSNADDRRLIAPVPQQERDYLSGGDDVEGEE----- 105 Query: 153 ANNPQDDGETKKIDCNETMWRINKPVDDSSLT-VRSVCVRDMGTEMTPIASQ 1 AN D ETKK+DC+E +WRINK V +S+ + VRS+CVRDMGTEMTPIASQ Sbjct: 106 ANGWPDSTETKKVDCDEPIWRINKTVQNSTASAVRSICVRDMGTEMTPIASQ 157 >ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|222864665|gb|EEF01796.1| predicted protein [Populus trichocarpa] Length = 351 Score = 117 bits (293), Expect = 2e-24 Identities = 75/171 (43%), Positives = 95/171 (55%), Gaps = 9/171 (5%) Frame = -3 Query: 486 EEKACYEIGSAAQENQSTTNSYTFEFHXXXXXXXXXXXK-----PTPSKWDDAQKWLVGL 322 E+K CY G + S S FEFH + PTPSKWDDAQKWLVGL Sbjct: 2 EDKGCYNHGPTQEIPSSKATS--FEFHKGNGASRGGHHRTALGKPTPSKWDDAQKWLVGL 59 Query: 321 STSRDXXXXXXXXXXXXXXXXXNADDRRLLSSQSQKGRDSCSSLDGILGDYS---SVPIA 151 S NADDRRL++ Q D S D + G+ + S+ I Sbjct: 60 SRG------GGGDRKESQPRNSNADDRRLIAPVPQMEHDYSSGEDEVGGEAANGCSISIT 113 Query: 150 NNPQDDGETKKIDCNETMWRINKPVDDSSLT-VRSVCVRDMGTEMTPIASQ 1 N Q + ETKK+DC+E++WR+NKP +S+++ VRS+CVRDMGTEMTPIASQ Sbjct: 114 N--QYEVETKKVDCDESVWRVNKPAQNSTMSAVRSICVRDMGTEMTPIASQ 162 >ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|222852458|gb|EEE90005.1| predicted protein [Populus trichocarpa] Length = 366 Score = 117 bits (293), Expect = 2e-24 Identities = 77/175 (44%), Positives = 98/175 (56%), Gaps = 9/175 (5%) Frame = -3 Query: 498 MMSGEEKACYEIGSAAQENQSTTNSYTFEFHXXXXXXXXXXXK-----PTPSKWDDAQKW 334 M S E+K CY G + S+ N+ +FEFH + PTPSKWDDAQKW Sbjct: 1 MRSVEDKGCYNHGPT--QEISSGNAISFEFHKGNGASRSGHHRTALGKPTPSKWDDAQKW 58 Query: 333 LVGLSTSRDXXXXXXXXXXXXXXXXXNADDRRLLSSQSQKGRDSCSSLDGILG---DYSS 163 LVGLS NADDRRL++ Q ++ S D + G + S Sbjct: 59 LVGLSRG------GGGDKKESKPRNSNADDRRLIAPVPQMEQEYSSGEDEVEGKAENGCS 112 Query: 162 VPIANNPQDDGETKKIDCNETMWRINKPVDDSSL-TVRSVCVRDMGTEMTPIASQ 1 + I N Q + ETK +DC+E++WRINKP +S++ VRSVCVRDMGTEMTPIASQ Sbjct: 113 ISIIN--QYEVETKNVDCDESVWRINKPAQNSTMNAVRSVCVRDMGTEMTPIASQ 165 >ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853782 [Vitis vinifera] Length = 359 Score = 113 bits (282), Expect = 4e-23 Identities = 72/172 (41%), Positives = 96/172 (55%), Gaps = 6/172 (3%) Frame = -3 Query: 498 MMSGEEKACYEIGSAAQENQSTTNSYTFEFHXXXXXXXXXXXK-----PTPSKWDDAQKW 334 M S E+K C G ++ S++++ +FEF + PTPSKWDDAQKW Sbjct: 1 MRSIEDKGCCNYGPT--KDISSSSAISFEFPKGNGTNRTTHHRTALGKPTPSKWDDAQKW 58 Query: 333 LVGLSTSRDXXXXXXXXXXXXXXXXXNADDRRLLSSQSQKGRDSCSSLDGILGDYSSVP- 157 LVGLS + ADDRRL++ QK +D S D + + P Sbjct: 59 LVGLSGGGEKNQSKTKPRNSN------ADDRRLIAPVPQKEKDYSSCEDEGEEEANGCPG 112 Query: 156 IANNPQDDGETKKIDCNETMWRINKPVDDSSLTVRSVCVRDMGTEMTPIASQ 1 A++ Q ETKK+DC+E+ W+INK +DSS VRS+CVRDMGTEMTPI+SQ Sbjct: 113 PASSNQYQVETKKVDCDESFWQINKASEDSSSAVRSICVRDMGTEMTPISSQ 164 >ref|NP_001149742.1| DNA binding protein [Zea mays] gi|195630481|gb|ACG36634.1| DNA binding protein [Zea mays] gi|413922707|gb|AFW62639.1| DNA binding protein isoform 1 [Zea mays] gi|413922708|gb|AFW62640.1| DNA binding protein isoform 2 [Zea mays] gi|413922709|gb|AFW62641.1| DNA binding protein isoform 3 [Zea mays] Length = 339 Score = 98.6 bits (244), Expect = 9e-19 Identities = 66/130 (50%), Positives = 74/130 (56%), Gaps = 8/130 (6%) Frame = -3 Query: 366 TPSKWDDAQKWLVGLSTSRDXXXXXXXXXXXXXXXXXNADDRRLLSSQSQKGRDSCSSLD 187 TPSKWDDAQKWLVG+S NADDRRLL S SQ GR SCSS+D Sbjct: 29 TPSKWDDAQKWLVGMSNGH----ADGTHGARVKPRSSNADDRRLLGSASQNGRVSCSSVD 84 Query: 186 GILGDYSSVPIANN--PQ------DDGETKKIDCNETMWRINKPVDDSSLTVRSVCVRDM 31 G L +YS V A + PQ D ETKKIDC + D +RSVC+RDM Sbjct: 85 GAL-EYSMVVAAPSTPPQAAEGGGDMEETKKIDCMVQLH------DSPQAVMRSVCLRDM 137 Query: 30 GTEMTPIASQ 1 GTEMTPIAS+ Sbjct: 138 GTEMTPIASK 147