BLASTX nr result

ID: Dioscorea21_contig00025379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025379
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565773.1| PREDICTED: uncharacterized protein LOC100832...    71   1e-10
ref|XP_002530574.1| something about silencing protein sas10, put...    71   1e-10
gb|ABI34329.1| Integrase core domain containing protein [Solanum...    69   4e-10
tpg|DAA47838.1| TPA: hypothetical protein ZEAMMB73_681100 [Zea m...    69   5e-10
ref|XP_002444808.1| hypothetical protein SORBIDRAFT_07g028350 [S...    68   9e-10

>ref|XP_003565773.1| PREDICTED: uncharacterized protein LOC100832433 [Brachypodium
           distachyon]
          Length = 648

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = -3

Query: 232 FTNSKDESKQKNSSKALNKRLETQDDFDDEVQPVANGGTHSISKLSKLIPNKGN---KSK 62
           + +S    K  N+    NK L+T DDFDDEVQ         + K  KL+ N  N   K+K
Sbjct: 417 YKSSGKPEKLSNTRTTKNKNLQTLDDFDDEVQK-----NTQVMKTKKLLVNAANSNIKNK 471

Query: 61  FVSGDDDVPMRDDIGERRRK 2
           FVSGDDD+P RD+IGERRRK
Sbjct: 472 FVSGDDDIPKRDEIGERRRK 491


>ref|XP_002530574.1| something about silencing protein sas10, putative [Ricinus
           communis] gi|223529873|gb|EEF31804.1| something about
           silencing protein sas10, putative [Ricinus communis]
          Length = 639

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
 Frame = -3

Query: 208 KQKNSSKALNKRLETQDDFDDEVQPVANG------GTHSI---SKLSKLIPNKGNKSKFV 56
           K +   K++N++LET DDF+D+   V  G      G  S+   SKLS+L+  K NK K +
Sbjct: 412 KAQKHPKSVNRQLETYDDFNDDAIDVERGNHGLSNGQASLLGSSKLSQLVSAKANKPKAI 471

Query: 55  SGDDDVPMRDDIGERRRK 2
           SGDDD+P RDDIGERRRK
Sbjct: 472 SGDDDLPKRDDIGERRRK 489


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223  SKDESKQKNSSKALNKRLETQDDFDDEVQPVANGG-THSISKLSKLIPNKGNKSKFVSGD 47
            ++   K+   S+ LN  L T DDFDD+     +   T S++KLS+L+ ++  + K +SGD
Sbjct: 1550 ARKNEKENKRSRLLNGMLATPDDFDDDAMGAEDDRETRSLNKLSRLLTSQVARPKIISGD 1609

Query: 46   DDVPMRDDIGERRRK 2
            DD+P RDDIGERRRK
Sbjct: 1610 DDLPKRDDIGERRRK 1624


>tpg|DAA47838.1| TPA: hypothetical protein ZEAMMB73_681100 [Zea mays]
          Length = 633

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = -3

Query: 235 NFTNSKDESKQKNSSKALNKRLETQDDFDDEVQPVANGGTHSISKLSKLIPN--KGNKSK 62
           N T SK E   K  + +    L+T DDFDDEV        + + K SKL+    K NKS 
Sbjct: 406 NLTRSKPEKSSKTRTTSDKSGLQTLDDFDDEVLK-----NNQMMKPSKLVAAAAKSNKSM 460

Query: 61  FVSGDDDVPMRDDIGERRRK 2
           FVSGDDD+P RD+IGERRRK
Sbjct: 461 FVSGDDDLPKRDNIGERRRK 480


>ref|XP_002444808.1| hypothetical protein SORBIDRAFT_07g028350 [Sorghum bicolor]
           gi|241941158|gb|EES14303.1| hypothetical protein
           SORBIDRAFT_07g028350 [Sorghum bicolor]
          Length = 632

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/80 (52%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = -3

Query: 235 NFTNSKDESKQKNSSKALNKRLETQDDFDDEVQPVANGGTHSISKLSKLIPN--KGNKSK 62
           N   SK E   K  + + NK L+T DDFDDEV        + I K SKL+    K NKS 
Sbjct: 403 NLKKSKPEKLSKTRTTS-NKGLQTLDDFDDEVLK-----NNQIMKPSKLVAAAAKSNKSM 456

Query: 61  FVSGDDDVPMRDDIGERRRK 2
           FVSGDDD+P RD+IGERRRK
Sbjct: 457 FVSGDDDLPKRDNIGERRRK 476