BLASTX nr result

ID: Dioscorea21_contig00025361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025361
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF81046.1| KNOTTED-like homebox protein 1 [Cocos nucifera]        192   5e-47
gb|ABI74672.1| class I KNOX-like 1 protein [Elaeis guineensis]        187   2e-45
dbj|BAF56426.1| SHOOTMERISTEMLESS-like protein [Ruscus aculeatus]     174   2e-41
gb|AEX56222.1| knotted-like 1 protein [Dactylorhiza fuchsii]          158   8e-37
emb|CAN64264.1| hypothetical protein VITISV_033719 [Vitis vinifera]   157   2e-36

>gb|ADF81046.1| KNOTTED-like homebox protein 1 [Cocos nucifera]
          Length = 333

 Score =  192 bits (488), Expect = 5e-47
 Identities = 106/188 (56%), Positives = 118/188 (62%), Gaps = 5/188 (2%)
 Frame = -3

Query: 601 MEARNGSNGTSSMMGFGGEAHGGLTPLMIMPLMAATQXXXXXXXXXXXXXXXXXXXXXXX 422
           ME R GS   S +MG  G+  G L+PLMIMPLMA+                         
Sbjct: 1   MEGRGGSGDNSGLMGGFGDGSGSLSPLMIMPLMASRSVLPPTPHMSNNGLFLPPPPSNAG 60

Query: 421 XXXXXXXXXXXTDHPHLLDTTNLLKAKIMSHPQYPRLLSAYVNCHKVGAPPEVVARLEEA 242
                                +++KAKIM+HPQYPRLLSAYVNCHKVGAPPEVVARLEEA
Sbjct: 61  GEDYDD---------------SIIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEA 105

Query: 241 CTSSLMVGRASSSTFV-----GSSAGDDPGLDQFMEAYCEMLTKYEQELSKPFKEAMLFL 77
           C +SLM+GRASSS        G   G+DP LDQFMEAYCEMLTKYEQELSKPFKEAMLFL
Sbjct: 106 CATSLMMGRASSSAAAGDGGSGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMLFL 165

Query: 76  SRVDAQFK 53
           SR+DAQFK
Sbjct: 166 SRIDAQFK 173


>gb|ABI74672.1| class I KNOX-like 1 protein [Elaeis guineensis]
          Length = 352

 Score =  187 bits (475), Expect = 2e-45
 Identities = 106/191 (55%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
 Frame = -3

Query: 601 MEARNGSNG---TSSMMGFGGEAHGGLTPLMIMPLMAATQXXXXXXXXXXXXXXXXXXXX 431
           ME R GS G    S +MG   +  G L+PLMIMPLMA+                      
Sbjct: 17  MEGRGGSGGGGDNSGLMGGFSDGSGSLSPLMIMPLMASRPVLPPTPHMSNNGLFLPPPLS 76

Query: 430 XXXXXXXXXXXXXXTDHPHLLDTTNLLKAKIMSHPQYPRLLSAYVNCHKVGAPPEVVARL 251
                                   +++KAKIM+HPQYPRLLSAYVNCHKVGAPPEVVARL
Sbjct: 77  NAAGEDYD---------------NSVIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARL 121

Query: 250 EEACTSSLMVGRASSSTFV-----GSSAGDDPGLDQFMEAYCEMLTKYEQELSKPFKEAM 86
           EEAC +SLM+GRASSS+       G   G+DP LDQFMEAYCEMLTKYEQELSKPFKEAM
Sbjct: 122 EEACATSLMMGRASSSSAAGDGGSGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFKEAM 181

Query: 85  LFLSRVDAQFK 53
           LFLSR+DAQFK
Sbjct: 182 LFLSRIDAQFK 192


>dbj|BAF56426.1| SHOOTMERISTEMLESS-like protein [Ruscus aculeatus]
          Length = 321

 Score =  174 bits (440), Expect = 2e-41
 Identities = 84/102 (82%), Positives = 94/102 (92%)
 Frame = -3

Query: 358 NLLKAKIMSHPQYPRLLSAYVNCHKVGAPPEVVARLEEACTSSLMVGRASSSTFVGSSAG 179
           N+LKAKIMSHP YP+LLSAY+NC KVGAPPEVVARLEEAC+SSLM+GRA+SS+   S+ G
Sbjct: 41  NILKAKIMSHPHYPKLLSAYINCQKVGAPPEVVARLEEACSSSLMIGRAASSS-SSSAVG 99

Query: 178 DDPGLDQFMEAYCEMLTKYEQELSKPFKEAMLFLSRVDAQFK 53
            DP LDQFMEAYCEMLTKYEQELSKPFKEAM+FLSR+DAQFK
Sbjct: 100 GDPALDQFMEAYCEMLTKYEQELSKPFKEAMMFLSRIDAQFK 141


>gb|AEX56222.1| knotted-like 1 protein [Dactylorhiza fuchsii]
          Length = 298

 Score =  158 bits (400), Expect = 8e-37
 Identities = 80/103 (77%), Positives = 85/103 (82%)
 Frame = -3

Query: 361 TNLLKAKIMSHPQYPRLLSAYVNCHKVGAPPEVVARLEEACTSSLMVGRASSSTFVGSSA 182
           T LLKAKIMSHPQYPRLL  Y+N HKVGAPPEVVARLEEAC SSL+    S      +S 
Sbjct: 41  TTLLKAKIMSHPQYPRLLPTYINLHKVGAPPEVVARLEEACASSLI----SCGPGGAASG 96

Query: 181 GDDPGLDQFMEAYCEMLTKYEQELSKPFKEAMLFLSRVDAQFK 53
           G+DP LDQFMEAYCEML KYEQELSKPFKEAMLFLSR+DAQFK
Sbjct: 97  GEDPALDQFMEAYCEMLAKYEQELSKPFKEAMLFLSRIDAQFK 139


>emb|CAN64264.1| hypothetical protein VITISV_033719 [Vitis vinifera]
          Length = 359

 Score =  157 bits (397), Expect = 2e-36
 Identities = 97/206 (47%), Positives = 116/206 (56%), Gaps = 23/206 (11%)
 Frame = -3

Query: 601 MEARNGSNG---TSSMMGFGGEAHGGLTPLMIMPLM----AATQXXXXXXXXXXXXXXXX 443
           ME   G  G   TS MMGFG  ++G  + +M+MPLM    A T                 
Sbjct: 1   MEVGGGGGGPSTTSCMMGFGNNSNGLSSMVMMMPLMSSSNAETSKVFLPLPFWNNNNSSN 60

Query: 442 XXXXXXXXXXXXXXXXXXTDHPHL---------LDTTN-------LLKAKIMSHPQYPRL 311
                              +H +           +TTN        +KAKIM+HP YPRL
Sbjct: 61  NPNQQSSQKVSALMPQGSCNHNNSGCYFMEGSNSNTTNNHDCTSCSMKAKIMAHPHYPRL 120

Query: 310 LSAYVNCHKVGAPPEVVARLEEACTSSLMVGRASSSTFVGSSAGDDPGLDQFMEAYCEML 131
           L+AYVNC KVGAPPEVVARLEEAC S   +GR+++S       G+DP LDQFMEAYCEML
Sbjct: 121 LAAYVNCQKVGAPPEVVARLEEACASEEAMGRSATSC-----VGEDPALDQFMEAYCEML 175

Query: 130 TKYEQELSKPFKEAMLFLSRVDAQFK 53
           TKYEQEL+KPFKEAMLFLSR++ QFK
Sbjct: 176 TKYEQELTKPFKEAMLFLSRIECQFK 201


Top