BLASTX nr result

ID: Dioscorea21_contig00025353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025353
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   278   1e-72
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   278   1e-72
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   267   2e-69
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ...   261   1e-67
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...   250   2e-64

>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
           vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
           product [Vitis vinifera]
          Length = 489

 Score =  278 bits (710), Expect = 1e-72
 Identities = 138/216 (63%), Positives = 167/216 (77%)
 Frame = -3

Query: 836 EISGDRSYFYRGYKGFNTVDSLNQHYIVTPKNVKEVYLAYLLSKMKEKSIRSSIIFVSTC 657
           E+S +++YFY  Y+GF TV+SL Q YI  PKNVK+VYL ++LSKM+E  IRS+IIFVSTC
Sbjct: 246 ELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRSAIIFVSTC 305

Query: 656 RSCHXXXXXXXXXEFSVVALHSYKSQSLRLAALSRFKSGQIPILLATDVASRGLDIPTVD 477
           RSCH         +  V ALHS+KSQSLRLAA+ RFKSGQ+PILLATDVASRGLDIPTVD
Sbjct: 306 RSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASRGLDIPTVD 365

Query: 476 LVINYDIPRFPRDYVHXXXXXXXXXXXGLSISFVTQNDERLVKVIEDEIGKKLDAYECKE 297
           LV+NYDIPR+PRDYVH           GLS+S VTQND  L+  IE  +GK+LD ++CKE
Sbjct: 366 LVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQLDKFDCKE 425

Query: 296 NEVLENITKVFKARRITRMKMIDDEFDEKVQARKEQ 189
            EVL+NITKV+KARR+  MKM+DD F+EK +ARK Q
Sbjct: 426 KEVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQ 461


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  278 bits (710), Expect = 1e-72
 Identities = 138/216 (63%), Positives = 167/216 (77%)
 Frame = -3

Query: 836 EISGDRSYFYRGYKGFNTVDSLNQHYIVTPKNVKEVYLAYLLSKMKEKSIRSSIIFVSTC 657
           E+S +++YFY  Y+GF TV+SL Q YI  PKNVK+VYL ++LSKM+E  IRS+IIFVSTC
Sbjct: 349 ELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRSAIIFVSTC 408

Query: 656 RSCHXXXXXXXXXEFSVVALHSYKSQSLRLAALSRFKSGQIPILLATDVASRGLDIPTVD 477
           RSCH         +  V ALHS+KSQSLRLAA+ RFKSGQ+PILLATDVASRGLDIPTVD
Sbjct: 409 RSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASRGLDIPTVD 468

Query: 476 LVINYDIPRFPRDYVHXXXXXXXXXXXGLSISFVTQNDERLVKVIEDEIGKKLDAYECKE 297
           LV+NYDIPR+PRDYVH           GLS+S VTQND  L+  IE  +GK+LD ++CKE
Sbjct: 469 LVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQLDKFDCKE 528

Query: 296 NEVLENITKVFKARRITRMKMIDDEFDEKVQARKEQ 189
            EVL+NITKV+KARR+  MKM+DD F+EK +ARK Q
Sbjct: 529 KEVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQ 564


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus]
          Length = 491

 Score =  267 bits (683), Expect = 2e-69
 Identities = 131/216 (60%), Positives = 165/216 (76%)
 Frame = -3

Query: 836 EISGDRSYFYRGYKGFNTVDSLNQHYIVTPKNVKEVYLAYLLSKMKEKSIRSSIIFVSTC 657
           ++S +++YFY  Y+GF TVD L Q Y+  PK+VK++YL +LLSKM++  IRS+IIFV TC
Sbjct: 251 KLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRSAIIFVQTC 310

Query: 656 RSCHXXXXXXXXXEFSVVALHSYKSQSLRLAALSRFKSGQIPILLATDVASRGLDIPTVD 477
           +SCH         +  V ALHS KSQS RLAAL RFKSG++P+LLATDVASRGLDIPTVD
Sbjct: 311 KSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVASRGLDIPTVD 370

Query: 476 LVINYDIPRFPRDYVHXXXXXXXXXXXGLSISFVTQNDERLVKVIEDEIGKKLDAYECKE 297
           LVINYDIPRFPRDYVH           GL++SF+TQND  L+  IE  +GK+L+ +ECKE
Sbjct: 371 LVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLGKQLEIFECKE 430

Query: 296 NEVLENITKVFKARRITRMKMIDDEFDEKVQARKEQ 189
           NEVLENITKV+KAR + +MKM+D  F+EKV+ RK+Q
Sbjct: 431 NEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQ 466


>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 502

 Score =  261 bits (668), Expect = 1e-67
 Identities = 128/216 (59%), Positives = 165/216 (76%)
 Frame = -3

Query: 836 EISGDRSYFYRGYKGFNTVDSLNQHYIVTPKNVKEVYLAYLLSKMKEKSIRSSIIFVSTC 657
           E+S +++YFY  Y+GF TVD+L Q Y++ PKNVK+VYL Y+LSKM++  IRS+IIFVSTC
Sbjct: 258 EVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYILSKMEDMGIRSAIIFVSTC 317

Query: 656 RSCHXXXXXXXXXEFSVVALHSYKSQSLRLAALSRFKSGQIPILLATDVASRGLDIPTVD 477
           R+C+         E    ALHS+KSQSLRL+AL RFKSGQ  IL+ATDVASRGLDIPTVD
Sbjct: 318 RTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFKSGQASILIATDVASRGLDIPTVD 377

Query: 476 LVINYDIPRFPRDYVHXXXXXXXXXXXGLSISFVTQNDERLVKVIEDEIGKKLDAYECKE 297
           LV+NYD+PR+PRDYVH           GL++SF++QND  L++ IE  +GK+L  +ECKE
Sbjct: 378 LVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQNDFVLIREIEAVLGKQLGEFECKE 437

Query: 296 NEVLENITKVFKARRITRMKMIDDEFDEKVQARKEQ 189
           NEVL +ITK+FKAR +  MKM+DD F+EK + RK+Q
Sbjct: 438 NEVLSDITKIFKARHVATMKMLDDGFEEKEKERKKQ 473


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  250 bits (639), Expect = 2e-64
 Identities = 126/216 (58%), Positives = 159/216 (73%)
 Frame = -3

Query: 836 EISGDRSYFYRGYKGFNTVDSLNQHYIVTPKNVKEVYLAYLLSKMKEKSIRSSIIFVSTC 657
           E+S +++YFY  Y+GF TVD+LNQ YI  PKNVKEVYL Y+LSKM+E  IRS+IIFVS C
Sbjct: 256 ELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYILSKMEEMGIRSAIIFVSAC 315

Query: 656 RSCHXXXXXXXXXEFSVVALHSYKSQSLRLAALSRFKSGQIPILLATDVASRGLDIPTVD 477
            +C          +     L+S +SQS RLA+L RFKSGQ  IL+ATD+ASRGLDIPTVD
Sbjct: 316 STCRLLSSLLKELDHEPATLYSLESQSARLASLHRFKSGQASILIATDLASRGLDIPTVD 375

Query: 476 LVINYDIPRFPRDYVHXXXXXXXXXXXGLSISFVTQNDERLVKVIEDEIGKKLDAYECKE 297
           LVINYD+PR P DYVH           GL++S V Q+D +L+K IE E+GK+ + +ECKE
Sbjct: 376 LVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKAIEAEVGKQFEKFECKE 435

Query: 296 NEVLENITKVFKARRITRMKMIDDEFDEKVQARKEQ 189
           NEVL +ITKV+KARR+ +MKM+DD FDE V+ RK+Q
Sbjct: 436 NEVLSDITKVYKARRVAKMKMMDDGFDELVKERKKQ 471


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