BLASTX nr result

ID: Dioscorea21_contig00025337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025337
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [S...    91   9e-17
ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arab...    90   2e-16
ref|NP_001077474.1| P-loop containing nucleoside triphosphate hy...    89   6e-16
ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group] g...    89   6e-16
gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indi...    89   6e-16

>ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
           gi|241942352|gb|EES15497.1| hypothetical protein
           SORBIDRAFT_08g000390 [Sorghum bicolor]
          Length = 1128

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 56/123 (45%), Positives = 67/123 (54%)
 Frame = -2

Query: 417 MPTPVGSXXXXXXXXXXXXXXXXXXXXXXXXXAQTTSLHVVSALLSPSFHXXXXXXXXXX 238
           MPTPV +                         AQTTSLH++++LL+P+            
Sbjct: 1   MPTPVPAARQCLAPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTA-APLLRDALAR 59

Query: 237 XXXXXXXXXLQFKALELCFGVALDRLPSAHPPPAEPAVSNSLMAAIKRSQANQRRNPDTF 58
                    LQ KAL+LCF V+LDRLPS+     EP V+NSLMAAIKRSQANQRRNPDTF
Sbjct: 60  ARSAAYSPRLQLKALDLCFAVSLDRLPSSSNDQHEPPVANSLMAAIKRSQANQRRNPDTF 119

Query: 57  HLY 49
           H Y
Sbjct: 120 HFY 122


>ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
           lyrata] gi|297338229|gb|EFH68646.1| hypothetical protein
           ARALYDRAFT_311783 [Arabidopsis lyrata subsp. lyrata]
          Length = 977

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 58/124 (46%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
 Frame = -2

Query: 417 MPTPVGSXXXXXXXXXXXXXXXXXXXXXXXXXAQTTSLHVVSALLSPSFHXXXXXXXXXX 238
           MPTPV +                         AQTTSLH VSALL+              
Sbjct: 1   MPTPVTTARECLTEEAARALDDAVAVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60

Query: 237 XXXXXXXXXLQFKALELCFGVALDRLPSAHPPPAE--PAVSNSLMAAIKRSQANQRRNPD 64
                    LQF+ALELC GV+LDRLPS+  P  E  P VSNSLMAAIKRSQANQRR+P+
Sbjct: 61  ARSTPYSSRLQFRALELCVGVSLDRLPSSKSPATEEDPPVSNSLMAAIKRSQANQRRHPE 120

Query: 63  TFHL 52
           T+HL
Sbjct: 121 TYHL 124


>ref|NP_001077474.1| P-loop containing nucleoside triphosphate hydrolase domain and
           Clp-N motif-containing protein [Arabidopsis thaliana]
           gi|8954026|gb|AAF82200.1|AC067971_8 Strong similarity to
           an unknown protein F23F1.11 gi|7486038 from Arabidopsis
           thaliana BAC F23F1 gb|AC004680. ESTs gb|T75672,
           gb|N65732 and gb|AA404793 come from this gene
           [Arabidopsis thaliana] gi|332189971|gb|AEE28092.1|
           P-loop containing nucleoside triphosphate hydrolase
           domain and Clp-N motif-containing protein [Arabidopsis
           thaliana]
          Length = 979

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 57/124 (45%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
 Frame = -2

Query: 417 MPTPVGSXXXXXXXXXXXXXXXXXXXXXXXXXAQTTSLHVVSALLSPSFHXXXXXXXXXX 238
           MPTPV +                         AQTTSLH VSALL+              
Sbjct: 1   MPTPVTTARECLTEEAARALDDAVVVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60

Query: 237 XXXXXXXXXLQFKALELCFGVALDRLPSAHPPPAE--PAVSNSLMAAIKRSQANQRRNPD 64
                    LQF+ALELC GV+LDRLPS+  P  E  P VSNSLMAAIKRSQANQRR+P+
Sbjct: 61  ARSVPYSSRLQFRALELCVGVSLDRLPSSKSPATEEDPPVSNSLMAAIKRSQANQRRHPE 120

Query: 63  TFHL 52
           ++HL
Sbjct: 121 SYHL 124


>ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group]
           gi|108862072|gb|ABA95594.2| expressed protein [Oryza
           sativa Japonica Group] gi|113648432|dbj|BAF28944.1|
           Os12g0104300 [Oryza sativa Japonica Group]
          Length = 1129

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 57/128 (44%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = -2

Query: 417 MPTPVGSXXXXXXXXXXXXXXXXXXXXXXXXXAQTTSLHVVSALLSPSFHXXXXXXXXXX 238
           MPTPV +                         AQTTSLH++S+LL+P             
Sbjct: 1   MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSLLAPPA-PPLLRDALAR 59

Query: 237 XXXXXXXXXLQFKALELCFGVALDRLPSAHPPPA-----EPAVSNSLMAAIKRSQANQRR 73
                    +Q KAL+LCF V+LDRLPS     +     EP VSNSLMAAIKRSQANQRR
Sbjct: 60  ARSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPVSNSLMAAIKRSQANQRR 119

Query: 72  NPDTFHLY 49
           NPDTFH Y
Sbjct: 120 NPDTFHFY 127


>gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indica Group]
          Length = 1129

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 57/128 (44%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = -2

Query: 417 MPTPVGSXXXXXXXXXXXXXXXXXXXXXXXXXAQTTSLHVVSALLSPSFHXXXXXXXXXX 238
           MPTPV +                         AQTTSLH++S+LL+P             
Sbjct: 1   MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSLLAPPA-PPLLRDALAR 59

Query: 237 XXXXXXXXXLQFKALELCFGVALDRLPSAHPPPA-----EPAVSNSLMAAIKRSQANQRR 73
                    +Q KAL+LCF V+LDRLPS     +     EP VSNSLMAAIKRSQANQRR
Sbjct: 60  ARSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPVSNSLMAAIKRSQANQRR 119

Query: 72  NPDTFHLY 49
           NPDTFH Y
Sbjct: 120 NPDTFHFY 127


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