BLASTX nr result

ID: Dioscorea21_contig00025324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025324
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001131257.1| hypothetical protein [Zea mays] gi|194691012...    58   7e-07
gb|ACG46197.1| integral membrane protein like [Zea mays]               58   9e-07
ref|XP_002446793.1| hypothetical protein SORBIDRAFT_06g022790 [S...    57   1e-06
gb|ACN30572.1| unknown [Zea mays]                                      57   2e-06
ref|NP_001132403.1| uncharacterized protein LOC100193850 [Zea ma...    57   2e-06

>ref|NP_001131257.1| hypothetical protein [Zea mays] gi|194691012|gb|ACF79590.1| unknown
           [Zea mays] gi|414586337|tpg|DAA36908.1| TPA:
           hypothetical protein ZEAMMB73_571768 [Zea mays]
           gi|414586338|tpg|DAA36909.1| TPA: hypothetical protein
           ZEAMMB73_571768 [Zea mays]
          Length = 340

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +1

Query: 1   YSYFSVQEGKKKSADNVIPVSQMRDAESKPLLTAKTTGNHEEKDSDESRKTNGV 162
           YSYFSV+EGKKKSA++ +PVSQM D E++PLL          KD+++++K NG+
Sbjct: 291 YSYFSVREGKKKSANDALPVSQMADKEAEPLLAT--------KDNNDTKKANGL 336


>gb|ACG46197.1| integral membrane protein like [Zea mays]
          Length = 340

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +1

Query: 1   YSYFSVQEGKKKSADNVIPVSQMRDAESKPLLTAKTTGNHEEKDSDESRKTNGV 162
           YSYFSV+EGKKKSA++ +PVSQM D E +PLL          KDS++++K NG+
Sbjct: 291 YSYFSVREGKKKSANDALPVSQMPDKEVEPLLAT--------KDSNDTKKANGL 336


>ref|XP_002446793.1| hypothetical protein SORBIDRAFT_06g022790 [Sorghum bicolor]
           gi|241937976|gb|EES11121.1| hypothetical protein
           SORBIDRAFT_06g022790 [Sorghum bicolor]
          Length = 340

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +1

Query: 1   YSYFSVQEGKKKSADNVIPVSQMRDAESKPLLTAKTTGNHEEKDSDESRKTNGV 162
           YSYF V+EGKKKSA++ +PVSQM D E++PLL          KDS +S+K NG+
Sbjct: 291 YSYFFVREGKKKSANDALPVSQMSDKEAEPLLAT--------KDSTDSKKANGL 336


>gb|ACN30572.1| unknown [Zea mays]
          Length = 185

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +1

Query: 1   YSYFSVQEGKKKSADNVIPVSQMRDAESKPLLTAKTTGNHEEKDSDESRKTNGV 162
           YSYFSV+EGKKKSA++ +PVSQM D E +PLL          KDS+++ K NG+
Sbjct: 136 YSYFSVREGKKKSANDALPVSQMPDKEVEPLLAT--------KDSNDTEKANGL 181


>ref|NP_001132403.1| uncharacterized protein LOC100193850 [Zea mays]
           gi|194694286|gb|ACF81227.1| unknown [Zea mays]
           gi|413918943|gb|AFW58875.1| integral membrane protein
           like protein [Zea mays]
          Length = 340

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +1

Query: 1   YSYFSVQEGKKKSADNVIPVSQMRDAESKPLLTAKTTGNHEEKDSDESRKTNGV 162
           YSYFSV+EGKKKSA++ +PVSQM D E +PLL          KDS+++ K NG+
Sbjct: 291 YSYFSVREGKKKSANDALPVSQMPDKEVEPLLAT--------KDSNDTEKANGL 336


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