BLASTX nr result

ID: Dioscorea21_contig00025323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025323
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271716.1| PREDICTED: nuclear transcription factor Y su...   120   1e-25
ref|NP_199139.1| nuclear factor Y, subunit C13 [Arabidopsis thal...   118   6e-25
ref|XP_002863677.1| hypothetical protein ARALYDRAFT_917343 [Arab...   116   2e-24
ref|XP_004144200.1| PREDICTED: nuclear transcription factor Y su...   110   2e-22
ref|XP_002297836.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>ref|XP_002271716.1| PREDICTED: nuclear transcription factor Y subunit gamma [Vitis
           vinifera]
          Length = 140

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/132 (48%), Positives = 79/132 (59%)
 Frame = +2

Query: 26  EILNPLLPIGRVKKILKMDRDIKKVNSEALHLITLSTQLFIEFLAERSRTAAVEKKRKVI 205
           E + P LP+GRVKK++K+DRDI KVNSEAL LI+ ST+LF+ FLAE+S   A++KKR+ +
Sbjct: 8   EAIMPELPLGRVKKLVKLDRDINKVNSEALFLISCSTELFLRFLAEQSAEIAIQKKRRTV 67

Query: 206 KVEHLRSAARNHPPTSDFLLDCLXXXXXXXXXXXXTSRXXXXXXXXXXXXGARRIDDFFS 385
           K+EHLR AA+ H PT DFLLD L                           G RRIDDFF 
Sbjct: 68  KLEHLRIAAKKHRPTRDFLLDSLPVPSQPSDRPPADRIRPQPAAEKPLPAGTRRIDDFFR 127

Query: 386 KPSAGKQGTSED 421
           KP   K     D
Sbjct: 128 KPEKEKPSEVND 139


>ref|NP_199139.1| nuclear factor Y, subunit C13 [Arabidopsis thaliana]
           gi|10177387|dbj|BAB10588.1| unnamed protein product
           [Arabidopsis thaliana] gi|225879084|dbj|BAH30612.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007548|gb|AED94931.1| nuclear factor Y, subunit
           C13 [Arabidopsis thaliana]
          Length = 130

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/122 (50%), Positives = 75/122 (61%)
 Frame = +2

Query: 32  LNPLLPIGRVKKILKMDRDIKKVNSEALHLITLSTQLFIEFLAERSRTAAVEKKRKVIKV 211
           + P  PIGRVKKI+K+D+DI K+NSEALH+IT ST+LF+ FLAE+S     EKKRK + +
Sbjct: 8   IRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNL 67

Query: 212 EHLRSAARNHPPTSDFLLDCLXXXXXXXXXXXXTSRXXXXXXXXXXXXGARRIDDFFSKP 391
           +HLR A + H PTSDFLLD L             S             G RRIDDFFSK 
Sbjct: 68  DHLRIAVKRHQPTSDFLLDSLPLPAQPVKHTKSVS----DKKIPAPPIGTRRIDDFFSKG 123

Query: 392 SA 397
            A
Sbjct: 124 KA 125


>ref|XP_002863677.1| hypothetical protein ARALYDRAFT_917343 [Arabidopsis lyrata subsp.
           lyrata] gi|297309512|gb|EFH39936.1| hypothetical protein
           ARALYDRAFT_917343 [Arabidopsis lyrata subsp. lyrata]
          Length = 131

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/127 (48%), Positives = 79/127 (62%)
 Frame = +2

Query: 38  PLLPIGRVKKILKMDRDIKKVNSEALHLITLSTQLFIEFLAERSRTAAVEKKRKVIKVEH 217
           P  P+GRVKKI+K+D++I K+NSEALH+IT ST+LF+ FLAE+S     EKKRK + ++H
Sbjct: 10  PEFPLGRVKKIMKLDKEINKINSEALHVITYSTELFLHFLAEKSAIVTAEKKRKTVNLDH 69

Query: 218 LRSAARNHPPTSDFLLDCLXXXXXXXXXXXXTSRXXXXXXXXXXXXGARRIDDFFSKPSA 397
           LR+A + H PTSDFLLD L             S             G RRIDDFFSK   
Sbjct: 70  LRTAVKRHQPTSDFLLDSLPLPAQPVKHTKSVS----DKKAPPPPIGTRRIDDFFSK--- 122

Query: 398 GKQGTSE 418
           GK+ T +
Sbjct: 123 GKEKTDD 129


>ref|XP_004144200.1| PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis
           sativus]
          Length = 139

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/131 (43%), Positives = 76/131 (58%)
 Frame = +2

Query: 26  EILNPLLPIGRVKKILKMDRDIKKVNSEALHLITLSTQLFIEFLAERSRTAAVEKKRKVI 205
           E + P  P GRVKKI+K+D+DI KVNSEAL L++ +T+LF++ LAE+S  +A EKKRK +
Sbjct: 8   EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAAEKKRKTV 67

Query: 206 KVEHLRSAARNHPPTSDFLLDCLXXXXXXXXXXXXTSRXXXXXXXXXXXXGARRIDDFFS 385
           K+EH+R A + H   SDFLLD L                           G RRIDDFF 
Sbjct: 68  KLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTRRIDDFFR 127

Query: 386 KPSAGKQGTSE 418
           + +  K   +E
Sbjct: 128 RSTKTKSAETE 138


>ref|XP_002297836.1| predicted protein [Populus trichocarpa] gi|222845094|gb|EEE82641.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/117 (44%), Positives = 74/117 (63%)
 Frame = +2

Query: 38  PLLPIGRVKKILKMDRDIKKVNSEALHLITLSTQLFIEFLAERSRTAAVEKKRKVIKVEH 217
           P  P GR+K+I+K+D+D  KVN++AL L++ ST+LF+ FLAE+S   A+EKKRK++K++H
Sbjct: 7   PEFPTGRIKRIMKLDKDTNKVNADALFLVSSSTELFLRFLAEKSAEVAIEKKRKIVKLDH 66

Query: 218 LRSAARNHPPTSDFLLDCLXXXXXXXXXXXXTSRXXXXXXXXXXXXGARRIDDFFSK 388
           +R+A + H PTSDFLLD L             +             G RRID FF+K
Sbjct: 67  IRAAVKRHHPTSDFLLDSLPLPAQSSEKPASDNTSARTVTDKPAPAGTRRIDQFFAK 123


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