BLASTX nr result

ID: Dioscorea21_contig00025296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025296
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518962.1| conserved hypothetical protein [Ricinus comm...   156   3e-36
ref|XP_002277461.1| PREDICTED: uncharacterized protein LOC100253...   153   3e-35
ref|XP_002300527.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34
ref|XP_004145885.1| PREDICTED: uncharacterized protein LOC101211...   140   2e-31
ref|XP_002463501.1| hypothetical protein SORBIDRAFT_01g000880 [S...   137   1e-30

>ref|XP_002518962.1| conserved hypothetical protein [Ricinus communis]
           gi|223541949|gb|EEF43495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score =  156 bits (395), Expect = 3e-36
 Identities = 77/117 (65%), Positives = 91/117 (77%)
 Frame = -1

Query: 607 RHFSRKRAENVRKINPKVPREEAKVIANGLYQIIKDHGPLTVSNTWNLVKEAGINGVNSK 428
           R+FSR+RA NVRKINPKVP  EA +I+  LY IIK+ GPL+++NTWN  KEA I+G+NSK
Sbjct: 20  RYFSRQRAVNVRKINPKVPFPEAALISQSLYNIIKERGPLSIANTWNYAKEANISGLNSK 79

Query: 427 THMKIMLKWMRGREMLKLFCTHHGSSKKFLVSTLPEEPQPVLQESSSVLPSDTQKPS 257
           THMKIMLKWMRGR+MLK FC H GSSKKFL STLPEEP+    +  S     T+KPS
Sbjct: 80  THMKIMLKWMRGRKMLKFFCNHVGSSKKFLHSTLPEEPRSDQSKVLSEPNLQTEKPS 136


>ref|XP_002277461.1| PREDICTED: uncharacterized protein LOC100253102 [Vitis vinifera]
           gi|297742484|emb|CBI34633.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  153 bits (386), Expect = 3e-35
 Identities = 81/127 (63%), Positives = 93/127 (73%)
 Frame = -1

Query: 637 VAASLMKIAARHFSRKRAENVRKINPKVPREEAKVIANGLYQIIKDHGPLTVSNTWNLVK 458
           VAA L     R+FSRK A NVRKINPKVP +EA  IA  LYQ+IK +G L++SNTW   K
Sbjct: 13  VAAGLF---VRYFSRKCAVNVRKINPKVPYQEASSIAQSLYQVIKQNGALSISNTWIQAK 69

Query: 457 EAGINGVNSKTHMKIMLKWMRGREMLKLFCTHHGSSKKFLVSTLPEEPQPVLQESSSVLP 278
           EAGI+G+NSKTHMKIMLKWMRGR+MLKLFC H GSSKKFL  TLPE+P+     SS    
Sbjct: 70  EAGISGLNSKTHMKIMLKWMRGRKMLKLFCNHVGSSKKFLHCTLPEDPEVAQLRSSLEHK 129

Query: 277 SDTQKPS 257
             T+K S
Sbjct: 130 PQTKKRS 136


>ref|XP_002300527.1| predicted protein [Populus trichocarpa] gi|222847785|gb|EEE85332.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  149 bits (377), Expect = 4e-34
 Identities = 78/118 (66%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
 Frame = -1

Query: 607 RHFSRKRAENVRKINPKVPREEAKVIANGLYQIIKDHGPLTVSNTWNLVKEAGINGVNSK 428
           RHFSR RA +V++INPKVP  EA  IA  LYQ+IK+HGPLTVSNTWN VKEA I+G+NSK
Sbjct: 24  RHFSRARAVDVKRINPKVPFSEAASIAQSLYQVIKEHGPLTVSNTWNQVKEANISGLNSK 83

Query: 427 THMKIMLKWMRGREMLKLFCTHHGSSKKFLVSTLPEEPQPVLQESSSVLPSDT-QKPS 257
           THMKIMLKWMRGR+MLKLFC  + +SKKFL  +LPEEP+     S+  L   T +KPS
Sbjct: 84  THMKIMLKWMRGRKMLKLFC--NPNSKKFLHCSLPEEPRTEQSNSAPELNLQTKRKPS 139


>ref|XP_004145885.1| PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus]
           gi|449507219|ref|XP_004162966.1| PREDICTED:
           uncharacterized LOC101211684 [Cucumis sativus]
          Length = 154

 Score =  140 bits (354), Expect = 2e-31
 Identities = 64/108 (59%), Positives = 88/108 (81%)
 Frame = -1

Query: 610 ARHFSRKRAENVRKINPKVPREEAKVIANGLYQIIKDHGPLTVSNTWNLVKEAGINGVNS 431
           ARHFSRKRAEN+RKINPK+  +EA ++A  LY +++ HGPLT+SN W   +E+G+NG+NS
Sbjct: 27  ARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNS 86

Query: 430 KTHMKIMLKWMRGREMLKLFCTHHGSSKKFLVSTLPEEPQPVLQESSS 287
           KTHMK++LKWMRGR+ML LFC + GS+KKFL+ T P++P+    ++SS
Sbjct: 87  KTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSS 133


>ref|XP_002463501.1| hypothetical protein SORBIDRAFT_01g000880 [Sorghum bicolor]
           gi|241917355|gb|EER90499.1| hypothetical protein
           SORBIDRAFT_01g000880 [Sorghum bicolor]
          Length = 160

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/131 (51%), Positives = 86/131 (65%)
 Frame = -1

Query: 679 MLFRRXXXXXXXXGVAASLMKIAARHFSRKRAENVRKINPKVPREEAKVIANGLYQIIKD 500
           M F R        G   +  ++  RHFSRKRA NV++INPKVP+EEA  I+  L QI+ D
Sbjct: 1   MQFLRGGGGGGGGGFGGTAWEVLRRHFSRKRAVNVKRINPKVPKEEAVAISERLVQILSD 60

Query: 499 HGPLTVSNTWNLVKEAGINGVNSKTHMKIMLKWMRGREMLKLFCTHHGSSKKFLVSTLPE 320
           HGPLTV N WN  K+AGI G+NSKTHMKI+LKWM GR ++KL C H G++KKFL S   E
Sbjct: 61  HGPLTVGNAWNHAKDAGIAGLNSKTHMKILLKWMTGRNIVKLSCVHVGNAKKFLYSPFTE 120

Query: 319 EPQPVLQESSS 287
                L  +++
Sbjct: 121 SSAEALSAAAA 131


Top