BLASTX nr result

ID: Dioscorea21_contig00025287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025287
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [G...   248   5e-64
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   246   2e-63
ref|XP_002303565.1| GRAS family transcription factor [Populus tr...   245   3e-63
ref|XP_003549861.1| PREDICTED: scarecrow-like protein 28-like [G...   243   2e-62
gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]       242   2e-62

>ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [Glycine max]
          Length = 664

 Score =  248 bits (632), Expect = 5e-64
 Identities = 119/141 (84%), Positives = 128/141 (90%)
 Frame = -2

Query: 429 LVDDEDDATAFRLLNHVSPIPKFLHFTLNERLLRVFEGKDRVHIIDFDIKQGLQWPGLFQ 250
           +V+D++ ATA RLLN V+PIP+FLHFT NE LLR FEGKDRVHIIDFDIKQGLQW GLFQ
Sbjct: 347 MVEDDESATAMRLLNQVTPIPRFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWSGLFQ 406

Query: 249 SLASRPNPPSHVRITGIGESKQDLQDTGARLAGFAEALHLPFEFHPVVDRLEDVRLWMLH 70
           SLASR NPP+HVRITGIGESKQDL +TG RLAGFAEAL+LPFEFHPVVDRLEDVRLWMLH
Sbjct: 407 SLASRSNPPTHVRITGIGESKQDLNETGERLAGFAEALNLPFEFHPVVDRLEDVRLWMLH 466

Query: 69  VKEREFVAVNCVLQLHKALYD 7
           VKE E VAVNCVLQLHK LYD
Sbjct: 467 VKEHETVAVNCVLQLHKTLYD 487


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score =  246 bits (627), Expect = 2e-63
 Identities = 121/148 (81%), Positives = 131/148 (88%)
 Frame = -2

Query: 450 PREIADQLVDDEDDATAFRLLNHVSPIPKFLHFTLNERLLRVFEGKDRVHIIDFDIKQGL 271
           PRE+ D++  D+D  TA RLLN VSPIPKF+HFT NE LLR FEGKDRVHIIDFDIKQGL
Sbjct: 349 PREL-DRV--DDDSGTALRLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIKQGL 405

Query: 270 QWPGLFQSLASRPNPPSHVRITGIGESKQDLQDTGARLAGFAEALHLPFEFHPVVDRLED 91
           QWP LFQSLASR NPPSHVRITGIGESKQ+L +TG RLAGFAEAL+LPFEFHPVVDRLED
Sbjct: 406 QWPTLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLED 465

Query: 90  VRLWMLHVKEREFVAVNCVLQLHKALYD 7
           VRLWMLHVKERE VA+NCV Q+HK LYD
Sbjct: 466 VRLWMLHVKERECVAINCVFQMHKTLYD 493


>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score =  245 bits (625), Expect = 3e-63
 Identities = 119/148 (80%), Positives = 131/148 (88%)
 Frame = -2

Query: 450 PREIADQLVDDEDDATAFRLLNHVSPIPKFLHFTLNERLLRVFEGKDRVHIIDFDIKQGL 271
           PRE+ D++  D+D  TA RLLN VSPIPKF+HFT NE LLR FEGKDRVHIIDFDI+QGL
Sbjct: 348 PREL-DRV--DDDSGTALRLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIRQGL 404

Query: 270 QWPGLFQSLASRPNPPSHVRITGIGESKQDLQDTGARLAGFAEALHLPFEFHPVVDRLED 91
           QWP LFQSLASR NPPSHVRITGIGESKQ+L +TG RLAGFAEAL+LPFEFHPVVDRLED
Sbjct: 405 QWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLED 464

Query: 90  VRLWMLHVKEREFVAVNCVLQLHKALYD 7
           VRLWMLHVKERE VA+NC+ Q+HK LYD
Sbjct: 465 VRLWMLHVKERECVAINCIFQMHKTLYD 492


>ref|XP_003549861.1| PREDICTED: scarecrow-like protein 28-like [Glycine max]
          Length = 669

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/141 (82%), Positives = 125/141 (88%)
 Frame = -2

Query: 429 LVDDEDDATAFRLLNHVSPIPKFLHFTLNERLLRVFEGKDRVHIIDFDIKQGLQWPGLFQ 250
           +V+D++ ATA RLLN V+PIPKFLHFT NE LLR FEGKDRVHIIDFDIKQGLQWP LFQ
Sbjct: 352 MVEDDESATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQ 411

Query: 249 SLASRPNPPSHVRITGIGESKQDLQDTGARLAGFAEALHLPFEFHPVVDRLEDVRLWMLH 70
           SLASR NPP HVRITGIGESKQDL +TG RLAGFAE L+LPFEFHPVVDRLEDVRLWMLH
Sbjct: 412 SLASRSNPPIHVRITGIGESKQDLNETGERLAGFAEVLNLPFEFHPVVDRLEDVRLWMLH 471

Query: 69  VKEREFVAVNCVLQLHKALYD 7
           VKE E VAVNCV QLHK L+D
Sbjct: 472 VKEHETVAVNCVSQLHKTLHD 492


>gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 503

 Score =  242 bits (618), Expect = 2e-62
 Identities = 119/151 (78%), Positives = 131/151 (86%)
 Frame = -2

Query: 453 PPREIADQLVDDEDDATAFRLLNHVSPIPKFLHFTLNERLLRVFEGKDRVHIIDFDIKQG 274
           PPR++ D+L  D+D  TA RLLN V+PIPKF+HFT NE LLR FEG+DRVHIIDFDIKQG
Sbjct: 353 PPRDL-DRL--DDDSGTALRLLNQVTPIPKFIHFTANEILLRAFEGQDRVHIIDFDIKQG 409

Query: 273 LQWPGLFQSLASRPNPPSHVRITGIGESKQDLQDTGARLAGFAEALHLPFEFHPVVDRLE 94
           LQWP  FQSLASR NPPSHVRITGIGESKQ+L +TG RL+GFAEAL+LPFEFHPVVDRLE
Sbjct: 410 LQWPSFFQSLASRTNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLE 469

Query: 93  DVRLWMLHVKEREFVAVNCVLQLHKALYDEN 1
           DVRLWMLHVKE+E VAVNCV QLHK LY  N
Sbjct: 470 DVRLWMLHVKEKESVAVNCVFQLHKTLYSGN 500


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