BLASTX nr result

ID: Dioscorea21_contig00025278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025278
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]                           98   8e-19
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...    92   6e-17
ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group] g...    86   4e-15
emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group] gi|116310...    86   4e-15

>dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
          Length = 552

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182
           EEEFTDDDGTTYKWDRGLRAWVPQD+ +  G  YGL+EMT+  EEEVFP +   +  + E
Sbjct: 193 EEEFTDDDGTTYKWDRGLRAWVPQDDTSSMGGQYGLDEMTFLQEEEVFPTVNIEDAASKE 252

Query: 183 EPKTTVEQVEIKSGGKRK 236
           +   T + +E K  GKRK
Sbjct: 253 KFNGTSDTLEPKHNGKRK 270


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
 Frame = +3

Query: 3   EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182
           EEEFTDDDGTTYKWDRGLRAWVPQDN +     YGLEEMT+  EE+VFP +        E
Sbjct: 152 EEEFTDDDGTTYKWDRGLRAWVPQDNTSSVTGQYGLEEMTFLQEEDVFPTVDINNAAFKE 211

Query: 183 EPKTT--VEQVEIKSGGKRK 236
           E   +   E +E K  GKRK
Sbjct: 212 EINGSGESETLESKHNGKRK 231


>ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = +3

Query: 3   EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182
           E+EFTDDDGTTYKWDR LRAWVPQDNL+     YG+E+MT+  +EEVF  +   + +  +
Sbjct: 146 EDEFTDDDGTTYKWDRSLRAWVPQDNLSSVSGQYGVEQMTFHEQEEVFLNVNAADASLKD 205

Query: 183 EPKTTVEQVEIKSGGKRK 236
           E   T E VE +   KRK
Sbjct: 206 EANGTGEVVESQRSDKRK 223


>ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group]
           gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza
           sativa Japonica Group] gi|113564771|dbj|BAF15114.1|
           Os04g0496400 [Oryza sativa Japonica Group]
           gi|125590877|gb|EAZ31227.1| hypothetical protein
           OsJ_15326 [Oryza sativa Japonica Group]
          Length = 476

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +3

Query: 3   EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182
           E+EFTDDDGT YKWDR LRAWVPQD+L GK  +Y +E+MT++ EEEVF       +T +E
Sbjct: 123 EDEFTDDDGTVYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLE 182

Query: 183 EPKTTVEQVEIKSGGK 230
           E   + E +EIK   K
Sbjct: 183 ENNVSAE-IEIKEPTK 197


>emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group] gi|116310709|emb|CAH67506.1|
           OSIGBa0092E01.1 [Oryza sativa Indica Group]
           gi|125548880|gb|EAY94702.1| hypothetical protein
           OsI_16479 [Oryza sativa Indica Group]
          Length = 476

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +3

Query: 3   EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182
           E+EFTDDDGT YKWDR LRAWVPQD+L GK  +Y +E+MT++ EEEVF       +T +E
Sbjct: 123 EDEFTDDDGTVYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLE 182

Query: 183 EPKTTVEQVEIKSGGK 230
           E   + E +EIK   K
Sbjct: 183 ENNVSAE-IEIKEPTK 197


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