BLASTX nr result
ID: Dioscorea21_contig00025278
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00025278 (236 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas] 98 8e-19 ref|XP_002512940.1| Splicing factor U2AF-associated protein, put... 92 6e-17 ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group] g... 86 4e-15 emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group] gi|116310... 86 4e-15 >dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas] Length = 552 Score = 97.8 bits (242), Expect = 8e-19 Identities = 46/78 (58%), Positives = 56/78 (71%) Frame = +3 Query: 3 EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182 EEEFTDDDGTTYKWDRGLRAWVPQD+ + G YGL+EMT+ EEEVFP + + + E Sbjct: 193 EEEFTDDDGTTYKWDRGLRAWVPQDDTSSMGGQYGLDEMTFLQEEEVFPTVNIEDAASKE 252 Query: 183 EPKTTVEQVEIKSGGKRK 236 + T + +E K GKRK Sbjct: 253 KFNGTSDTLEPKHNGKRK 270 >ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] Length = 518 Score = 91.7 bits (226), Expect = 6e-17 Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 2/80 (2%) Frame = +3 Query: 3 EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182 EEEFTDDDGTTYKWDRGLRAWVPQDN + YGLEEMT+ EE+VFP + E Sbjct: 152 EEEFTDDDGTTYKWDRGLRAWVPQDNTSSVTGQYGLEEMTFLQEEDVFPTVDINNAAFKE 211 Query: 183 EPKTT--VEQVEIKSGGKRK 236 E + E +E K GKRK Sbjct: 212 EINGSGESETLESKHNGKRK 231 >ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1| predicted protein [Populus trichocarpa] Length = 497 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/78 (53%), Positives = 53/78 (67%) Frame = +3 Query: 3 EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182 E+EFTDDDGTTYKWDR LRAWVPQDNL+ YG+E+MT+ +EEVF + + + + Sbjct: 146 EDEFTDDDGTTYKWDRSLRAWVPQDNLSSVSGQYGVEQMTFHEQEEVFLNVNAADASLKD 205 Query: 183 EPKTTVEQVEIKSGGKRK 236 E T E VE + KRK Sbjct: 206 EANGTGEVVESQRSDKRK 223 >ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group] gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza sativa Japonica Group] gi|113564771|dbj|BAF15114.1| Os04g0496400 [Oryza sativa Japonica Group] gi|125590877|gb|EAZ31227.1| hypothetical protein OsJ_15326 [Oryza sativa Japonica Group] Length = 476 Score = 85.5 bits (210), Expect = 4e-15 Identities = 42/76 (55%), Positives = 53/76 (69%) Frame = +3 Query: 3 EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182 E+EFTDDDGT YKWDR LRAWVPQD+L GK +Y +E+MT++ EEEVF +T +E Sbjct: 123 EDEFTDDDGTVYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLE 182 Query: 183 EPKTTVEQVEIKSGGK 230 E + E +EIK K Sbjct: 183 ENNVSAE-IEIKEPTK 197 >emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group] gi|116310709|emb|CAH67506.1| OSIGBa0092E01.1 [Oryza sativa Indica Group] gi|125548880|gb|EAY94702.1| hypothetical protein OsI_16479 [Oryza sativa Indica Group] Length = 476 Score = 85.5 bits (210), Expect = 4e-15 Identities = 42/76 (55%), Positives = 53/76 (69%) Frame = +3 Query: 3 EEEFTDDDGTTYKWDRGLRAWVPQDNLNGKGQDYGLEEMTYSVEEEVFPILAPTETTAVE 182 E+EFTDDDGT YKWDR LRAWVPQD+L GK +Y +E+MT++ EEEVF +T +E Sbjct: 123 EDEFTDDDGTVYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLE 182 Query: 183 EPKTTVEQVEIKSGGK 230 E + E +EIK K Sbjct: 183 ENNVSAE-IEIKEPTK 197