BLASTX nr result

ID: Dioscorea21_contig00025206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025206
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   236   2e-60
gb|AEL99012.1| transcription elongation factor (TFIIS) family pr...   219   3e-55
ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago ...   219   5e-55
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   218   6e-55
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              218   8e-55

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  236 bits (603), Expect = 2e-60
 Identities = 130/219 (59%), Positives = 151/219 (68%), Gaps = 22/219 (10%)
 Frame = +2

Query: 59  DRPIDSEQRRILAVKELLEDPDQNEEVLVNRLQKLIDMDITFKALKETDIGRHVNGLRKH 238
           D  ID EQ +ILA+KE LEDPDQ E+ LV+ LQ L DMDITFKALKETDIGRHVN LRKH
Sbjct: 96  DGSIDEEQSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKH 155

Query: 239 PSGEVRRLVKLLVRKWKDLVDDWVKSNSDA----------ADSPHQMAGKMNQN-EHQLV 385
           PS EVRRLVK LVRKWKDLVD+WVK ++             DSP Q   K   N  HQ+ 
Sbjct: 156 PSNEVRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVP 215

Query: 386 DFDCSPNPHNGGL-----VLESESRGKNIPRRDAP------PKLSPSATVKAVKDEKDGL 532
           DF  SPNPHNG        +E E + K +PRR+ P      P +  S  +   +++KD L
Sbjct: 216 DFAYSPNPHNGSSGSDKNNVELEPKRKAVPRRETPNKPNQTPPIPTSVALNKQREQKDSL 275

Query: 533 IDPERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPK 649
           +D E+LASAR+RLHENYQEAQNAKKQRTIQVMDIH+IPK
Sbjct: 276 VDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPK 314


>gb|AEL99012.1| transcription elongation factor (TFIIS) family protein, partial
           [Silene latifolia]
          Length = 278

 Score =  219 bits (559), Expect = 3e-55
 Identities = 123/231 (53%), Positives = 152/231 (65%), Gaps = 17/231 (7%)
 Frame = +2

Query: 8   DEGDLHADQDQNHRINPDRPIDSEQRRILAVKELLEDPDQNEEVLVNRLQKLIDMDITFK 187
           +E D H + +Q      D     E++RI ++KE LEDP+Q ++ LV+ LQ L DMDITFK
Sbjct: 31  EEEDHHKELEQRVVDEDDEFEYDEEKRIFSIKEQLEDPNQTDDSLVDLLQTLADMDITFK 90

Query: 188 ALKETDIGRHVNGLRKHPSGEVRRLVKLLVRKWKDLVDDWVKSNSDA-----------AD 334
           ALKETDIGRHVN LRKHPS +VR+LVKLLVRKWKDLVD+WV++N+              D
Sbjct: 91  ALKETDIGRHVNRLRKHPSNDVRQLVKLLVRKWKDLVDEWVRANTAGGVHSSSNLIADGD 150

Query: 335 SPHQMAGKMNQNEH--QLVDFDCSPNPHNGGLVLE-SESRGKNIPRRDAPPKLSPSATVK 505
           SP Q   K + + H  Q+ DF  SPNPHNG    + SE + K +P    PP+ +P A   
Sbjct: 151 SPQQNISKNHPSGHHNQVPDFGYSPNPHNGSSGSDKSEYKPKAVPAHTPPPQRAPPAKQT 210

Query: 506 AV---KDEKDGLIDPERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPK 649
                  +K    DPERLASARKRL ENYQEAQNAKKQRT+QV+DIHE+PK
Sbjct: 211 PALQPNRQKQVAADPERLASARKRLQENYQEAQNAKKQRTMQVLDIHELPK 261


>ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
           gi|355491578|gb|AES72781.1| hypothetical protein
           MTR_3g095380 [Medicago truncatula]
          Length = 357

 Score =  219 bits (557), Expect = 5e-55
 Identities = 118/216 (54%), Positives = 146/216 (67%), Gaps = 23/216 (10%)
 Frame = +2

Query: 71  DSEQRRILAVKELLEDPDQNEEVLVNRLQKLIDMDITFKALKETDIGRHVNGLRKHPSGE 250
           D EQ++IL +KELLEDP Q+E+ L+  LQ L+D+DITF+ LKETDIGR+VN LRKHPS +
Sbjct: 120 DDEQKKILEIKELLEDPHQSEDTLMELLQNLVDIDITFQELKETDIGRNVNQLRKHPSSD 179

Query: 251 VRRLVKLLVRKWKDLVDDWVKSNSDA--------ADSPHQMAGKMNQNEHQLVDFDCSPN 406
           VRRLVKLLV+KWK++VDDWVK N            DSP Q     N + HQ+ DF  SPN
Sbjct: 180 VRRLVKLLVKKWKEIVDDWVKQNPQRGKSTLMADGDSPLQKT-TPNGHNHQIPDFAYSPN 238

Query: 407 PHNGG-------LVLESESRGKNIPRRDAPPKLSPSATVKA--------VKDEKDGLIDP 541
           PHNG           E + + K++PR+D PPK  PS  V A         +++K+   D 
Sbjct: 239 PHNGSSGSDRNTSEAEPKPKPKSVPRKDPPPKPRPSPPVTAPTSAPQNRQREQKESNFDA 298

Query: 542 ERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPK 649
           ERLA+ARKRL  NY+EA NAKKQRTIQVMDIHE+PK
Sbjct: 299 ERLAAARKRLQANYKEADNAKKQRTIQVMDIHELPK 334


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score =  218 bits (556), Expect = 6e-55
 Identities = 122/212 (57%), Positives = 144/212 (67%), Gaps = 18/212 (8%)
 Frame = +2

Query: 68  IDSEQRRILAVKELLEDPDQNEEVLVNRLQKLIDMDITFKALKETDIGRHVNGLRKHPSG 247
           +D E+ RIL +KE LE PDQ ++ +V+ LQ L DMDITFKALKETDIGRHVN LRKHPS 
Sbjct: 104 LDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSN 163

Query: 248 EVRRLVKLLVRKWKDLVDDWVKSNSDA---------ADSPHQMAGKMNQNEHQLVDFDCS 400
           +VRRLVK LVRKWKDLVD+WVKSN             DSP Q   +     HQ+ DF  S
Sbjct: 164 DVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMEGDSPPQKIPR--TGHHQVPDFGYS 221

Query: 401 PNPHNGGL-----VLESESRGKNIPRRDAPPKLSPSATVKA----VKDEKDGLIDPERLA 553
           PNP NG         E E + K IPR++ P + + SA V +       ++D  IDP++ A
Sbjct: 222 PNPQNGSSGSDKNNAEPEPKVKAIPRKEVPTRPAQSAPVSSSFPPPNKQRDTAIDPDKFA 281

Query: 554 SARKRLHENYQEAQNAKKQRTIQVMDIHEIPK 649
           SARKRLHENYQEAQNAKKQRTIQVMDIH+IPK
Sbjct: 282 SARKRLHENYQEAQNAKKQRTIQVMDIHDIPK 313


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  218 bits (555), Expect = 8e-55
 Identities = 122/213 (57%), Positives = 144/213 (67%), Gaps = 19/213 (8%)
 Frame = +2

Query: 68  IDSEQRRILAVKELLEDPDQNEEVLVNRLQKLIDMDITFKALKETDIGRHVNGLRKHPSG 247
           +D E+ RIL +KE LE PDQ ++ +V+ LQ L DMDITFKALKETDIGRHVN LRKHPS 
Sbjct: 104 LDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSN 163

Query: 248 EVRRLVKLLVRKWKDLVDDWVKSNSDA----------ADSPHQMAGKMNQNEHQLVDFDC 397
           +VRRLVK LVRKWKDLVD+WVKSN              DSP Q   +     HQ+ DF  
Sbjct: 164 DVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPR--TGHHQVPDFGY 221

Query: 398 SPNPHNGGL-----VLESESRGKNIPRRDAPPKLSPSATVKA----VKDEKDGLIDPERL 550
           SPNP NG         E E + K IPR++ P + + SA V +       ++D  IDP++ 
Sbjct: 222 SPNPQNGSSGSDKNNAEPEPKVKAIPRKEVPTRPAQSAPVSSSFPPPNKQRDTAIDPDKF 281

Query: 551 ASARKRLHENYQEAQNAKKQRTIQVMDIHEIPK 649
           ASARKRLHENYQEAQNAKKQRTIQVMDIH+IPK
Sbjct: 282 ASARKRLHENYQEAQNAKKQRTIQVMDIHDIPK 314


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