BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025160
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              453   e-125
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   385   e-104
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   381   e-103
emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]   380   e-103
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   377   e-102

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  453 bits (1165), Expect = e-125
 Identities = 231/441 (52%), Positives = 294/441 (66%)
 Frame = -2

Query: 1634 LLQPLPIPQQIWEDIAMDFVCGLPGSKGFSVILVVVDRLSKYGHFMPLKNDFSSVGVADI 1455
            LLQPLPIPQQ+WED+AMDF+ GLP S G SVI+VV+DRL+KY HF+PLK D++S  VA+ 
Sbjct: 1132 LLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEA 1191

Query: 1454 FINSVLKLHGVPRSIVCDRDKAFTSRFWQHLFAKMGTSIQMSTAYHPQSDGQTEALNKCL 1275
            F++ ++KLHG+PRSIV DRD+ FTS FWQHLF   GT++ MS+AYHPQSDGQ+E LNKCL
Sbjct: 1192 FMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCL 1251

Query: 1274 EMYLRCFTNEHYGNWVELLPWAEYWYNTAYQTSAGMTPFRIVYGREPPGLVPYTETIDDP 1095
            EMYLRCFT EH   WV+ LPWAE+WYNTAY  S GMTPFR +YGREPP L     +IDDP
Sbjct: 1252 EMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDP 1311

Query: 1094 PLVSQWLSNRDKILSTLKGNLLRAQMRMKRHADMKRSELQFNDGDWVFVKLQPYRQQSVL 915
              V + L++RD +L+ LK NL RAQ  MKR AD KR ++ F  GD V VKLQPYRQ S +
Sbjct: 1312 AEVREQLTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAV 1371

Query: 914  LRRNHKLSMKYFGPFQVLQKIGSVAYRLNLPAGAKIHPVFHVSLLKQCVGDPVLSTVPLP 735
            LR+N KLSM+YFGPF+VL KIG VAY+L LP+ A+IHPVFHVS LK   G      +PLP
Sbjct: 1372 LRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLP 1431

Query: 734  LMSSSQGPVIIPAAILQYRQVRRENRCITRVLIQWHGLPEDDTSWEDVDQLIREYPDLDL 555
            L  +  GPV+ P  IL  R + R +  I ++L+QW    +D+ +WED++ +   YP  +L
Sbjct: 1432 LTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNL 1491

Query: 554  EDKVKAYEGGIVILPVNIVSKDKSKVELGDSDGGLKSKDTCXXXXXXXXXXXXXRGYVIS 375
            EDKV     G V   ++   K  +  E   S+ GL +K                      
Sbjct: 1492 EDKVVFKGEGNVTNGMSRGEKVNNTAE-SSSERGLHNK---------------------L 1529

Query: 374  AEKPNIKKGSEEEKRGWMLVE 312
            A+   + +G  E+K  W + E
Sbjct: 1530 ADFEELGRGKREKKPSWKITE 1550


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  385 bits (990), Expect = e-104
 Identities = 188/374 (50%), Positives = 260/374 (69%), Gaps = 1/374 (0%)
 Frame = -2

Query: 1634 LLQPLPIPQQIWEDIAMDFVCGLPGSKGFSVILVVVDRLSKYGHFMPLKNDFSSVGVADI 1455
            LLQPLPIP  +WEDI+MDF+ GLP SKG   ILV+VDRLSKY HF+ L++ F+++ VAD+
Sbjct: 1231 LLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADL 1290

Query: 1454 FINSVLKLHGVPRSIVCDRDKAFTSRFWQHLFAKMGTSIQMSTAYHPQSDGQTEALNKCL 1275
            F+  V++LHG P SIV DRD+ F S FW+ LF   GT+++ S+AYHPQ+DGQTE +N+ L
Sbjct: 1291 FVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRAL 1350

Query: 1274 EMYLRCFTNEHYGNWVELLPWAEYWYNTAYQTSAGMTPFRIVYGREPPGLVPYTETIDDP 1095
            E YLRCF   H  +W + LPWAE+ YNT+  TS  M+PF+++YGR+PP +V   +     
Sbjct: 1351 ETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSV 1410

Query: 1094 PLVSQWLSNRDKILSTLKGNLLRAQMRMKRHADMKRSELQFNDGDWVFVKLQPYRQQSVL 915
              +   L +RD I+  L+ NL+RAQ RMK +AD  R+E++F  GD VF++LQPYRQ+S+ 
Sbjct: 1411 ESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLA 1470

Query: 914  LRRNHKLSMKYFGPFQVLQKIGSVAYRLNLPAGAKIHPVFHVSLLKQCVGD-PVLSTVPL 738
             R   KL+ +++GPF VLQ+IG+ AY+L LP  +KIHPVFHVSLLK+ VG+ PVL T+P 
Sbjct: 1471 KRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIP- 1529

Query: 737  PLMSSSQGPVIIPAAILQYRQVRRENRCITRVLIQWHGLPEDDTSWEDVDQLIREYPDLD 558
            P +      V+ P  +L  RQ+R+  +  T  LI+W GLP  + +WED+  +   +P   
Sbjct: 1530 PHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRFPSFH 1589

Query: 557  LEDKVKAYEGGIVI 516
            LEDKV  +  GIV+
Sbjct: 1590 LEDKVNVWGAGIVM 1603


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  381 bits (978), Expect = e-103
 Identities = 180/369 (48%), Positives = 253/369 (68%), Gaps = 6/369 (1%)
 Frame = -2

Query: 1634 LLQPLPIPQQIWEDIAMDFVCGLPGSKGFSVILVVVDRLSKYGHFMPLKNDFSSVGVADI 1455
            LLQPLPIP Q+W+DI MDF+ GLP S G + I+VVVDRLSK  HF+ + + +++  +A+ 
Sbjct: 971  LLQPLPIPCQVWDDITMDFIDGLPRSDGKTSIMVVVDRLSKSAHFIAIAHPYTAKTLANK 1030

Query: 1454 FINSVLKLHGVPRSIVCDRDKAFTSRFWQHLFAKMGTSIQMSTAYHPQSDGQTEALNKCL 1275
            F+  V+KLHG+PRSI+ DRD  F S FWQ      GT ++M++AYHPQSDGQTE +N+C+
Sbjct: 1031 FVEGVVKLHGMPRSIISDRDPVFISNFWQEFLKLSGTKLRMTSAYHPQSDGQTEVVNRCI 1090

Query: 1274 EMYLRCFTNEHYGNWVELLPWAEYWYNTAYQTSAGMTPFRIVYGREPPGLVPY------T 1113
            E YLRCF +    +W  LLPWAEYWYNT Y +S GMTPF+ +YGR PP +  Y       
Sbjct: 1091 EQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYGRPPPAIPSYEIGSCPI 1150

Query: 1112 ETIDDPPLVSQWLSNRDKILSTLKGNLLRAQMRMKRHADMKRSELQFNDGDWVFVKLQPY 933
            E +DD       ++ R+++L  LK +L  A  RMK+ AD KR E+ F  GDWV+++LQPY
Sbjct: 1151 EELDDQ------MTARNELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPY 1204

Query: 932  RQQSVLLRRNHKLSMKYFGPFQVLQKIGSVAYRLNLPAGAKIHPVFHVSLLKQCVGDPVL 753
            RQQSV  R +HKLS +Y+GP+++ ++IG VAY+L L  G++IHPVFHVSLLK+ +G+  +
Sbjct: 1205 RQQSVFRRTSHKLSNRYYGPYEIEERIGPVAYKLKLSPGSRIHPVFHVSLLKKKIGEVAI 1264

Query: 752  STVPLPLMSSSQGPVIIPAAILQYRQVRRENRCITRVLIQWHGLPEDDTSWEDVDQLIRE 573
            +   LP ++      + P  +L  R V + +   +  L+ W GLPE++ +WED  QL+R 
Sbjct: 1265 ANDELPPLTEEGVIRLQPRKVLSTRWVNKGSTSASESLVLWEGLPEEEATWEDSQQLLRS 1324

Query: 572  YPDLDLEDK 546
            +P+L+LEDK
Sbjct: 1325 FPNLNLEDK 1333


>emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
          Length = 1122

 Score =  380 bits (975), Expect = e-103
 Identities = 184/371 (49%), Positives = 250/371 (67%)
 Frame = -2

Query: 1634 LLQPLPIPQQIWEDIAMDFVCGLPGSKGFSVILVVVDRLSKYGHFMPLKNDFSSVGVADI 1455
            LLQPLPIP  +W+DI MDF+ GLP S G + ILVVVD LSK  HF  L + F++  VA+ 
Sbjct: 675  LLQPLPIPCLVWDDITMDFIEGLPTSNGKNTILVVVDHLSKSAHFFALAHPFTAKMVAEK 734

Query: 1454 FINSVLKLHGVPRSIVCDRDKAFTSRFWQHLFAKMGTSIQMSTAYHPQSDGQTEALNKCL 1275
            F+  V+KLHG+P+SI+ DRD  F S+FWQ  F   GT ++MS++YHPQ+DGQ+E +N+C+
Sbjct: 735  FVEGVVKLHGMPKSIISDRDPVFMSQFWQEFFKLSGTQLKMSSSYHPQTDGQSEVVNRCV 794

Query: 1274 EMYLRCFTNEHYGNWVELLPWAEYWYNTAYQTSAGMTPFRIVYGREPPGLVPYTETIDDP 1095
            E YL C+ + H   W   LPW E+WYNT Y TS GMTPF+ +YGR PP +  Y       
Sbjct: 795  EQYLCCYAHHHPRKWSFFLPWVEFWYNTTYHTSTGMTPFQALYGRLPPNIPHYLMGTTPV 854

Query: 1094 PLVSQWLSNRDKILSTLKGNLLRAQMRMKRHADMKRSELQFNDGDWVFVKLQPYRQQSVL 915
              V Q L++RD IL  LK NL  A  RMK+ A+ KR  +++  GD VF+KLQPYRQQSV 
Sbjct: 855  HAVDQNLASRDAILRQLKTNLHVATNRMKQVANSKRRNIEYQVGDMVFLKLQPYRQQSVF 914

Query: 914  LRRNHKLSMKYFGPFQVLQKIGSVAYRLNLPAGAKIHPVFHVSLLKQCVGDPVLSTVPLP 735
             R + KL+ +++GP+Q+ Q+IG VAY+LNLP G+KIHP+FHVSLLK+ +G+P  +TV LP
Sbjct: 915  CRASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKKLGEPNNTTVELP 974

Query: 734  LMSSSQGPVIIPAAILQYRQVRRENRCITRVLIQWHGLPEDDTSWEDVDQLIREYPDLDL 555
            L +     V+ P  IL  R V++ +R     L++W  LP +D +WED   L   + +++L
Sbjct: 975  LTNDEGEIVLXPEGILDTRWVKKGSRIFEESLVKWKRLPLNDATWEDTKMLQDRFINVNL 1034

Query: 554  EDKVKAYEGGI 522
            EDKV   + GI
Sbjct: 1035 EDKVPVQDRGI 1045


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  377 bits (967), Expect = e-102
 Identities = 191/379 (50%), Positives = 251/379 (66%), Gaps = 1/379 (0%)
 Frame = -2

Query: 1634 LLQPLPIPQQIWEDIAMDFVCGLPGSKGFSVILVVVDRLSKYGHFMPLKNDFSSVGVADI 1455
            LL PLPIPQQIW D+++DFV GLP S  F+ ILVVVDRLSKY HF+PLK+ F++  V + 
Sbjct: 1257 LLSPLPIPQQIWSDVSLDFVEGLPSSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEA 1316

Query: 1454 FINSVLKLHGVPRSIVCDRDKAFTSRFWQHLFAKMGTSIQMSTAYHPQSDGQTEALNKCL 1275
            FI  V+KLHG P ++V DRD+ F S FW  LF   GT +Q STAYHPQ+DGQTE +N+CL
Sbjct: 1317 FIRDVVKLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCL 1376

Query: 1274 EMYLRCFTNEHYGNWVELLPWAEYWYNTAYQTSAGMTPFRIVYGREPPGLVPYTETIDDP 1095
            E YLRCF      +W + LPWAEYWYNT+Y ++   TPF+ VYGREPP L+ Y +   + 
Sbjct: 1377 ESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNN 1436

Query: 1094 PLVSQWLSNRDKILSTLKGNLLRAQMRMKRHADMKRSELQFNDGDWVFVKLQPYRQQSVL 915
              V + L +RD +L  L+ NL  AQ +MK+ AD  R ++ F   +WV++KL+PYRQ SV 
Sbjct: 1437 ANVEELLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVA 1496

Query: 914  LRRNHKLSMKYFGPFQVLQKIGSVAYRLNLPAGAKIHPVFHVSLLKQCVGDPVLSTVPLP 735
             R+N KLS +YFGPF+VL +IG VAY+L LP  + IHPVFHVS LK+ V  P  +   LP
Sbjct: 1497 HRKNEKLSQRYFGPFKVLHRIGQVAYKLQLPEHSTIHPVFHVSQLKRAV-PPSFTPQELP 1555

Query: 734  -LMSSSQGPVIIPAAILQYRQVRRENRCITRVLIQWHGLPEDDTSWEDVDQLIREYPDLD 558
             ++S +      P  +L  RQ    +     VL+QW GL   +++WE +  L+++YPD D
Sbjct: 1556 KILSPTLEWNTGPEKLLDIRQSNTNSG--PEVLVQWSGLSTLESTWEPLLTLVQQYPDFD 1613

Query: 557  LEDKVKAYEGGIVILPVNI 501
            LEDKV    G I  L V +
Sbjct: 1614 LEDKVSLLRGSIDRLQVTL 1632