BLASTX nr result
ID: Dioscorea21_contig00025148
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00025148 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813... 61 8e-08 emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 1e-07 ref|XP_003541064.1| PREDICTED: uncharacterized protein LOC100796... 59 3e-07 ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia... 59 5e-07 gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 57 1e-06 >ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813631 [Glycine max] Length = 1227 Score = 61.2 bits (147), Expect = 8e-08 Identities = 41/128 (32%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Frame = -1 Query: 368 GDQWDTSNFNFLFGDNLDCSVSVLPTIDH-----SSDPFWVWNPRPCSIKISSAVYHHLN 204 G +W+ S LF + S + L TI + W+W P I + + Y+ + Sbjct: 988 GWEWNFSWRRNLFDSEMGVSSTFLETIAAIRICGTLKDTWLWGAEPNGIFSTKSAYNLIK 1047 Query: 203 NLNSFSDQWSGWQLLWHIPVAPKVKHFIWKCLHGRLSTSSFLHYINLGPDNP-CVLCGLC 27 DQ+SG+ LW + V PKV F W+ L RL T L + DN C LC Sbjct: 1048 AEQLLEDQYSGFHQLWDLKVPPKVLSFAWRLLWDRLPTKDNLSRRQIQLDNDLCPLCQTQ 1107 Query: 26 RETIDHLF 3 ET HLF Sbjct: 1108 PETASHLF 1115 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 60.5 bits (145), Expect = 1e-07 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 7/132 (5%) Frame = -1 Query: 380 DFISGDQWDTSNFNFLFGDNLDCSVSVLPTIDHSSDPFWVWN-PRPCSIKISSAVYHHLN 204 + IS D+W+ N LF ++ +P W+W + + SA YH L Sbjct: 974 ELISNDRWNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELL 1033 Query: 203 NLNSFSDQWSG------WQLLWHIPVAPKVKHFIWKCLHGRLSTSSFLHYINLGPDNPCV 42 S WQ +W + PKVK F WK +H L+ + + + D C Sbjct: 1034 EDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACP 1093 Query: 41 LCGLCRETIDHL 6 CG ET +HL Sbjct: 1094 RCGEKEETTEHL 1105 >ref|XP_003541064.1| PREDICTED: uncharacterized protein LOC100796216 [Glycine max] Length = 646 Score = 59.3 bits (142), Expect = 3e-07 Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Frame = -1 Query: 368 GDQWDTSNFNFLFGDNLDCSVSVLPTIDH-----SSDPFWVWNPRPCSIKISSAVYHHLN 204 G QW+ S LF + + + L TI + W+W P I + + Y+ + Sbjct: 407 GWQWNFSWRRNLFDSKMGVASTFLETIAAIRICGTLKDTWLWGAEPNGILSTKSAYNLIK 466 Query: 203 NLNSFSDQWSGWQLLWHIPVAPKVKHFIWKCLHGRLSTSSFLHYINLGPDNP-CVLCGLC 27 DQ SG+ LW + V PKV F W+ L RL T L + DN C LC Sbjct: 467 AEQLLEDQDSGFHQLWDLKVPPKVLSFAWRLLWDRLPTKDNLSRRQIQLDNDLCPLCQTQ 526 Query: 26 RETIDHLF 3 ET HLF Sbjct: 527 PETTSHLF 534 >ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana] gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis thaliana] gi|7269807|emb|CAB79667.1| putative protein [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1| putative reverse transcriptase/RNA-dependent DNA polymerase [Arabidopsis thaliana] gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein [Arabidopsis thaliana] Length = 575 Score = 58.5 bits (140), Expect = 5e-07 Identities = 21/55 (38%), Positives = 35/55 (63%) Frame = -1 Query: 170 WQLLWHIPVAPKVKHFIWKCLHGRLSTSSFLHYINLGPDNPCVLCGLCRETIDHL 6 +Q +W +PK++HF+WKCL L + L Y +L ++ C+ C C+ET++HL Sbjct: 254 YQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHL 308 >gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1621 Score = 57.4 bits (137), Expect = 1e-06 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 12/131 (9%) Frame = -1 Query: 359 WDTSNFNFLFGDNLDCSVSVLPTIDHSSDPF-WVWNPRPC-SIKISSAVYHHL------N 204 WD + F + ++ +P D W ++ R C ++K + V + N Sbjct: 1227 WDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRN 1286 Query: 203 NLNSFSDQWSG----WQLLWHIPVAPKVKHFIWKCLHGRLSTSSFLHYINLGPDNPCVLC 36 S+ SG W+ LW + V K+KHF+W+ H L+ + LH+ + D CV+C Sbjct: 1287 GCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMC 1346 Query: 35 GLCRETIDHLF 3 G E HLF Sbjct: 1347 GRYNEDAGHLF 1357