BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025139
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   105   5e-21
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      105   5e-21
gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare su...   101   7e-20
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      100   9e-20
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   100   2e-19

>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1133

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/86 (59%), Positives = 60/86 (69%)
 Frame = -2

Query: 260 NFFKDVPDEQWIRTTDFTQLRSIGQSSAFCLQLPYGCSLPNIREYFVYYKEVDGPFHLLI 81
           N+F+DVPDEQW+RTTDFT    IG SS+ CL+LP    LPN  E F YYKE +G F L  
Sbjct: 197 NYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNENFFYYKENEGTFVLES 256

Query: 80  GSSFSRSLDLVPIVEPSPEVKVPYRI 3
           G +FSR+ DLVPIV PS  V +PY I
Sbjct: 257 GLTFSRNPDLVPIVGPSSGVNLPYNI 282


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/86 (56%), Positives = 62/86 (72%)
 Frame = -2

Query: 260 NFFKDVPDEQWIRTTDFTQLRSIGQSSAFCLQLPYGCSLPNIREYFVYYKEVDGPFHLLI 81
           N+FKD+PD+QW+RTTDFT+   IGQSS  CL+LP+   LPN RE F YYKE +G   L  
Sbjct: 196 NYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNFRENFAYYKENEGRLVLES 255

Query: 80  GSSFSRSLDLVPIVEPSPEVKVPYRI 3
           GSS+S +L LVPIV PS  + +P+ I
Sbjct: 256 GSSYSCNLSLVPIVCPSRVIDLPFEI 281


>gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
          Length = 1115

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/87 (56%), Positives = 58/87 (66%)
 Frame = -2

Query: 263 FNFFKDVPDEQWIRTTDFTQLRSIGQSSAFCLQLPYGCSLPNIREYFVYYKEVDGPFHLL 84
           FN+F+D  D+QW RTTDFT L SIGQS   CL+LP  C LPNIREYFVYYK  +  FH +
Sbjct: 200 FNYFRDDTDDQWTRTTDFTPLASIGQSYILCLELPADCYLPNIREYFVYYKNHNHDFHCM 259

Query: 83  IGSSFSRSLDLVPIVEPSPEVKVPYRI 3
            G S+S +   VPIV+      VPY I
Sbjct: 260 RGHSYSSNSCFVPIVKSQYFTDVPYEI 286


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = -2

Query: 260 NFFKDVPDEQWIRTTDFTQLRSIGQSSAFCLQLPYGCSLPNIREYFVYYKEVDGPFHLLI 81
           N+FKD+PD+QW+RTTDFT+   IGQSS   L+LP+   LPN RE F YYKE +G   L  
Sbjct: 196 NYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLPNFRENFAYYKENEGRLVLES 255

Query: 80  GSSFSRSLDLVPIVEPSPEVKVPYRI 3
           GSS+S +L LVPIV PS  + +P+ I
Sbjct: 256 GSSYSCNLSLVPIVCPSRVIDLPFEI 281


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/87 (57%), Positives = 57/87 (65%)
 Frame = -2

Query: 263 FNFFKDVPDEQWIRTTDFTQLRSIGQSSAFCLQLPYGCSLPNIREYFVYYKEVDGPFHLL 84
           FNFFKD PDEQWIR  DFT    IGQSSA CL+LP G  LPN RE F YY+E +  + L 
Sbjct: 199 FNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLPNFRENFAYYEESERQYTLQ 258

Query: 83  IGSSFSRSLDLVPIVEPSPEVKVPYRI 3
            G  FS++  LVPIV P   VK+ Y I
Sbjct: 259 TGVPFSQNWGLVPIVAPPLGVKISYDI 285