BLASTX nr result

ID: Dioscorea21_contig00025130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025130
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889076.1| integral membrane family protein [Arabidopsi...   138   5e-31
ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula...   137   7e-31
ref|XP_003592258.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mann...   137   7e-31
ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidops...   135   3e-30
gb|ACN25439.1| unknown [Zea mays] gi|413956547|gb|AFW89196.1| hy...   135   3e-30

>ref|XP_002889076.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334917|gb|EFH65335.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/115 (62%), Positives = 82/115 (71%)
 Frame = -1

Query: 432 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTLIGTVGLLICMFGGV 253
           FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLV+WDKHST +GT+GLLICMFGGV
Sbjct: 261 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVVWDKHSTFVGTLGLLICMFGGV 320

Query: 252 LYQQSTIKPKPTVSETKTRXXXXXXXXXXXEMQPSSEANQSEKLVLVSEKPK*NS 88
           +YQQST+K   T  E K                P  +  + EKL+ + E  + NS
Sbjct: 321 MYQQSTMKKPNTAQEAK----------------PQEQDEEQEKLLEMQENKESNS 359


>ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula]
           gi|355505842|gb|AES86984.1| GDP-mannose transporter
           [Medicago truncatula]
          Length = 650

 Score =  137 bits (346), Expect = 7e-31
 Identities = 72/102 (70%), Positives = 80/102 (78%)
 Frame = -1

Query: 432 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTLIGTVGLLICMFGGV 253
           FG+AISFFGFSCRRAISATGFTVLGIVNKLLTV+INLVIWDKHST +GTVGLLICM GGV
Sbjct: 454 FGVAISFFGFSCRRAISATGFTVLGIVNKLLTVMINLVIWDKHSTWVGTVGLLICMLGGV 513

Query: 252 LYQQSTIKPKPTVSETKTRXXXXXXXXXXXEMQPSSEANQSE 127
           +YQQST KPK  + ET+             EMQ +SE N S+
Sbjct: 514 MYQQSTSKPKAAIQETRQE---DEEQLKLLEMQVNSETNISD 552


>ref|XP_003592258.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
           [Medicago truncatula] gi|355481306|gb|AES62509.1|
           UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose
           transporter [Medicago truncatula]
          Length = 404

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/102 (71%), Positives = 79/102 (77%)
 Frame = -1

Query: 432 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTLIGTVGLLICMFGGV 253
           FGLAISFFGFSCRRAISATGFTVLGIVNKLLTV+INLVIWDKHST +GTVGLLICM GGV
Sbjct: 296 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVMINLVIWDKHSTWVGTVGLLICMLGGV 355

Query: 252 LYQQSTIKPKPTVSETKTRXXXXXXXXXXXEMQPSSEANQSE 127
           +YQQST KPK  + ET              EMQ +SE N S+
Sbjct: 356 MYQQSTSKPKAAIQETTQE---DEEQLKLLEMQVNSETNISD 394


>ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]
           gi|75198562|sp|Q9S845.1|GONS3_ARATH RecName:
           Full=GDP-mannose transporter GONST3; AltName:
           Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3
           gi|6554485|gb|AAF16667.1|AC012394_16 unknown protein;
           69155-70273 [Arabidopsis thaliana]
           gi|6573714|gb|AAF17634.1|AC009978_10 T23E18.26
           [Arabidopsis thaliana] gi|29329821|emb|CAD83087.1|
           GONST3 Golgi Nucleotide sugar transporter [Arabidopsis
           thaliana] gi|332197705|gb|AEE35826.1| golgi nucleotide
           sugar transporter 3 [Arabidopsis thaliana]
          Length = 372

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/115 (60%), Positives = 81/115 (70%)
 Frame = -1

Query: 432 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTLIGTVGLLICMFGGV 253
           FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINL++WDKHST +GT+GLL+CMFGGV
Sbjct: 261 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLMVWDKHSTFVGTLGLLVCMFGGV 320

Query: 252 LYQQSTIKPKPTVSETKTRXXXXXXXXXXXEMQPSSEANQSEKLVLVSEKPK*NS 88
           +YQQSTIK      E K                P  +  + EKL+ + E  + NS
Sbjct: 321 MYQQSTIKKPNATQEAK----------------PQEQDEEQEKLLEMQENKESNS 359


>gb|ACN25439.1| unknown [Zea mays] gi|413956547|gb|AFW89196.1| hypothetical protein
           ZEAMMB73_519687 [Zea mays]
          Length = 377

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/103 (66%), Positives = 79/103 (76%)
 Frame = -1

Query: 432 FGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTLIGTVGLLICMFGGV 253
           FGL+ISFFGFSCRRAISATGFTVLGIVNKLLTVVINL+IWDKH++ +GT+GLLICM GGV
Sbjct: 275 FGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLLIWDKHASFVGTIGLLICMSGGV 334

Query: 252 LYQQSTIKPKPTVSETKTRXXXXXXXXXXXEMQPSSEANQSEK 124
           LYQQST+KPK    E K             +MQ   E+N ++K
Sbjct: 335 LYQQSTMKPKAPKVEPKEENDNDEEQQKLLQMQGVQESNPTQK 377


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