BLASTX nr result

ID: Dioscorea21_contig00025118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025118
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458016.1| hypothetical protein SORBIDRAFT_03g025550 [S...    79   1e-12
gb|EAY74576.1| hypothetical protein OsI_02464 [Oryza sativa Indi...    60   7e-07
ref|NP_001043360.1| Os01g0566000 [Oryza sativa Japonica Group] g...    57   6e-06
ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]...    57   8e-06

>ref|XP_002458016.1| hypothetical protein SORBIDRAFT_03g025550 [Sorghum bicolor]
           gi|241929991|gb|EES03136.1| hypothetical protein
           SORBIDRAFT_03g025550 [Sorghum bicolor]
          Length = 322

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 79/297 (26%), Positives = 107/297 (36%), Gaps = 76/297 (25%)
 Frame = -1

Query: 822 DDDFPTRNPIRIVRLGDRIIEVSILNDEGNFAVKRWFQERDREKR----RSPLVAGLSFF 655
           DDD+     + ++R+G  +  V       +   KRW  E     R    R+PLVAGL   
Sbjct: 23  DDDYVDDGDVGVLRIGRNLAAVDTTFSSSDEVTKRWLAEASTVARGRRLRAPLVAGLVAL 82

Query: 654 RG---SPERCXXXXXXXXXXXKVIAGIALCLGGSHCLFIDNSSSYDRVTTAR-------- 508
           RG   S                 I  IALCLGGS  +     +   RV  A+        
Sbjct: 83  RGHDPSDRARGSTDFSPNDHDNPIRCIALCLGGSRAIVYSPEAYGCRVRKAKYDGDRLNF 142

Query: 507 ------ALRDFLADHRVTIVGVGFKKAVESFDKDWGIHLGKTVDARTLMEDAYGK----- 361
                  LR FL D R+T+   G ++A     K+WG+H+    +   L   A+GK     
Sbjct: 143 YSNNMTQLRAFLDDKRITVACFGAREATRKLAKEWGLHVALPEELTHLFALAFGKVAGVE 202

Query: 360 --------------------------------------CKMMGRT----------GLEEM 325
                                                    +G+T           LE M
Sbjct: 203 TEKKALKKPDKYWMGKAALARAKAKADRDDYDTDEEEEATNLGKTWRPPKVVSGLSLERM 262

Query: 324 AEIALN-GMRVRRLPMTTEKKYWFD-DIDEDRVLQATFDAFLCFEIGVKCLQMLGRP 160
           A +AL   MR+ R P    +  W    + E+    AT DA+LCFEI   CLQ LG P
Sbjct: 263 ARVALGPEMRLARCPPKVAQADWGSYYLGEEEWKYATRDAYLCFEIAACCLQKLGDP 319


>gb|EAY74576.1| hypothetical protein OsI_02464 [Oryza sativa Indica Group]
          Length = 321

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 77/318 (24%), Positives = 114/318 (35%), Gaps = 82/318 (25%)
 Frame = -1

Query: 867 MNRPLELSI--EKENEDDDDFPTRNPIR--IVRLGDRIIEVSILNDEGNFAVKRWFQERD 700
           M  P+E++     ++ DDDD    +P R  ++ +GD +  V +     +     WF+   
Sbjct: 1   MKGPVEVTFLDGDDDSDDDDRWYYSPRREAVLCIGDDLALVDVTFPVDDMDTNPWFRGIA 60

Query: 699 R----EKRRSPLVAGLSFFRGS-------PERCXXXXXXXXXXXKVIAGIALCLGGSHCL 553
           +     + R+PLV GL   RG        P                I  +A+C+GGSH L
Sbjct: 61  QLCRGHRLRAPLVVGLVALRGRAPPYNWCPWDASGVRGHPRDPRNPIRCVAICVGGSHAL 120

Query: 552 FID-----NSSSY--------DRVTTARALRDFLADHRVTIVGVGFKKAVESFDKDWGIH 412
                    SS Y        +       LR FL D RVT+  VG ++A E   ++W + 
Sbjct: 121 VYQPCCDRGSSKYTGGVLPFSEGGCKMARLRAFLRDRRVTVACVGAREAAEKLAEEWEVD 180

Query: 411 LGKTVDARTLMEDAYGKC------------------------------------------ 358
           + + V+   L   A+GK                                           
Sbjct: 181 VARPVELTDLFARAFGKVAGVDAVKPPKEPEPDRRWMTTSALLRAEAKAEAAAAKEDHYS 240

Query: 357 -KMMGRTGLEE---------MAEIALN-GMRVRRLPMTTEKKYWFD-DIDEDRVLQATFD 214
               G+  L E         MA +AL   MR+   P       W    +++     A  D
Sbjct: 241 YSKRGKRQLAEVVKGLSMERMAHVALGPEMRLAPWPEKAADADWGSCYLEKSDWKYAARD 300

Query: 213 AFLCFEIGVKCLQMLGRP 160
           A+LCFEI   CLQ LG P
Sbjct: 301 AYLCFEIAAVCLQKLGAP 318


>ref|NP_001043360.1| Os01g0566000 [Oryza sativa Japonica Group]
           gi|15528733|dbj|BAB64679.1| unknown protein [Oryza
           sativa Japonica Group] gi|113532891|dbj|BAF05274.1|
           Os01g0566000 [Oryza sativa Japonica Group]
           gi|215741579|dbj|BAG98074.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 321

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 28/197 (14%)
 Frame = -1

Query: 867 MNRPLELSI--EKENEDDDDFPTRNPIR--IVRLGDRIIEVSILNDEGNFAVKRWFQERD 700
           M  P+E++     ++ DDDD    +P R  ++ +GD +  V +     +     WF+   
Sbjct: 1   MKGPVEVTFLDGDDDSDDDDRWYYSPRREAVLCIGDDLALVDVTFPVDDMDTNPWFRGIA 60

Query: 699 R----EKRRSPLVAGLSFFRGS-------PERCXXXXXXXXXXXKVIAGIALCLGGSHCL 553
           +     + R+PLV GL   RG        P                I  IA+C+GGSH L
Sbjct: 61  QLCRGHRLRAPLVVGLVALRGRAPPYNWCPWDASGVRGHPRDPRNPIRCIAICVGGSHAL 120

Query: 552 FID-----NSSSY--------DRVTTARALRDFLADHRVTIVGVGFKKAVESFDKDWGIH 412
                    SS Y        +       LR FL D RVT+  VG ++A E   ++W + 
Sbjct: 121 VYQPCCDRGSSKYTGGVLPFSEGGCKMARLRAFLRDRRVTVACVGAREAAEKLAEEWEVD 180

Query: 411 LGKTVDARTLMEDAYGK 361
           + + V+   L   A+GK
Sbjct: 181 VARPVELTDLFARAFGK 197


>ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 211

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
 Frame = -1

Query: 594 IAGIALCLGGSHCLFIDNSSSYDRVTTAR---ALRDFLADHRVTIVGVGFKKAVESFDKD 424
           +A + LC+G S CL       Y  + + R   +L DFL +      GVG +  VE   +D
Sbjct: 75  VATLQLCIG-SRCLI------YQLIHSPRIPQSLFDFLKNSSYVFAGVGIESDVEKLVED 127

Query: 423 WGIHLGKTVDARTLMEDAYGKCKMMGRTGLEEMAEIALNG--MRVRRLPMTTEKKYWFDD 250
           +G+ +G  ++ R +  ++ G  K +   GL+E+ +  L     + +R+ M+     W   
Sbjct: 128 YGLSVGNVMELRRVAAESLG-VKELKNAGLKELVKQVLGKEIQKPKRVTMSRWDSMW--- 183

Query: 249 IDEDRVLQATFDAFLCFEIG 190
           +  D+V  A  DAF+C EIG
Sbjct: 184 LSHDQVQYACLDAFVCSEIG 203


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