BLASTX nr result

ID: Dioscorea21_contig00025040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025040
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300829.1| predicted protein [Populus trichocarpa] gi|2...   119   4e-25
ref|XP_003555341.1| PREDICTED: non-specific lipid-transfer prote...   117   1e-24
ref|XP_002524759.1| lipid binding protein, putative [Ricinus com...   117   1e-24
ref|XP_002524760.1| lipid binding protein, putative [Ricinus com...   115   7e-24
gb|AFK43474.1| unknown [Lotus japonicus]                              114   9e-24

>ref|XP_002300829.1| predicted protein [Populus trichocarpa] gi|222842555|gb|EEE80102.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  119 bits (298), Expect = 4e-25
 Identities = 61/111 (54%), Positives = 74/111 (66%)
 Frame = +1

Query: 61  MAPRLMQILLIFALVWMFSSSNMETMAQTSSNSCTSELANLVPCLNYITGNESKPSSSCC 240
           MA + +Q+ L+  L      S M     T+ + CT+ L  LVPCLNY+TGN S PSSSCC
Sbjct: 1   MASKGVQLSLMLVL------SMMLCHGATAQSGCTTALMGLVPCLNYVTGNSSTPSSSCC 54

Query: 241 TPLASVVQSQPLCLCLLLNGTFSSSGLTINQTRALGLPGLCNVNTPSASLC 393
           + LA++VQSQP CLC L+NG  SS G+ INQT AL LPG CNV TP AS C
Sbjct: 55  SQLATIVQSQPQCLCTLVNGGGSSFGIAINQTLALALPGACNVKTPPASQC 105


>ref|XP_003555341.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Glycine max]
          Length = 169

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/106 (55%), Positives = 73/106 (68%)
 Frame = +1

Query: 76  MQILLIFALVWMFSSSNMETMAQTSSNSCTSELANLVPCLNYITGNESKPSSSCCTPLAS 255
           M ++L+  ++ M     M   A+   +SCTS L NL PCLN+ITGN S PSS CCT L+S
Sbjct: 9   MGVVLVVMIISM-----MCVGAKAQQSSCTSALVNLSPCLNFITGNSSTPSSGCCTQLSS 63

Query: 256 VVQSQPLCLCLLLNGTFSSSGLTINQTRALGLPGLCNVNTPSASLC 393
           VV+SQP CLC +LNG  SS G+TINQT+AL LPG CNV TP  + C
Sbjct: 64  VVRSQPQCLCQVLNGGGSSLGVTINQTQALALPGACNVRTPPITQC 109


>ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis]
           gi|223535943|gb|EEF37602.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 187

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/111 (53%), Positives = 72/111 (64%)
 Frame = +1

Query: 61  MAPRLMQILLIFALVWMFSSSNMETMAQTSSNSCTSELANLVPCLNYITGNESKPSSSCC 240
           MA + ++++    LV M     +      + + CTS L  L PCLNY+TGN S PSSSCC
Sbjct: 1   MALKRVEMIAFLVLVMMICHGAV------AQSGCTSALMGLAPCLNYVTGNSSTPSSSCC 54

Query: 241 TPLASVVQSQPLCLCLLLNGTFSSSGLTINQTRALGLPGLCNVNTPSASLC 393
           + LA+VVQSQP CLC +LNG  SS G+TINQT AL LPG CNV TP  S C
Sbjct: 55  SQLATVVQSQPQCLCAMLNGGGSSLGITINQTLALSLPGACNVQTPPVSQC 105


>ref|XP_002524760.1| lipid binding protein, putative [Ricinus communis]
           gi|223535944|gb|EEF37603.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 170

 Score =  115 bits (287), Expect = 7e-24
 Identities = 60/112 (53%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 61  MAPRLMQILLI-FALVWMFSSSNMETMAQTSSNSCTSELANLVPCLNYITGNESKPSSSC 237
           M  R M+I+LI FA+   + +  ++      S+SCT+ L ++ PCLNYITGN S PSS C
Sbjct: 1   MEARRMEIILITFAVAATWCAGGVKAQ----SSSCTNVLISMSPCLNYITGNSSTPSSQC 56

Query: 238 CTPLASVVQSQPLCLCLLLNGTFSSSGLTINQTRALGLPGLCNVNTPSASLC 393
           CT LASVV+SQP CLC +LNG  SS G+ +NQT+AL LP  CNV TP  S C
Sbjct: 57  CTQLASVVRSQPQCLCEVLNGGASSLGINVNQTQALALPTTCNVQTPPISRC 108


>gb|AFK43474.1| unknown [Lotus japonicus]
          Length = 159

 Score =  114 bits (286), Expect = 9e-24
 Identities = 54/82 (65%), Positives = 62/82 (75%)
 Frame = +1

Query: 148 SSNSCTSELANLVPCLNYITGNESKPSSSCCTPLASVVQSQPLCLCLLLNGTFSSSGLTI 327
           + +SCTS L NL PCLNYITGN S PSS CC+ LASVV+SQP CLC +LNG  SS G++I
Sbjct: 24  AQSSCTSVLVNLSPCLNYITGNSSTPSSGCCSQLASVVRSQPQCLCQVLNGGGSSLGISI 83

Query: 328 NQTRALGLPGLCNVNTPSASLC 393
           NQT+AL LP  CNV TP  S C
Sbjct: 84  NQTQALALPSACNVQTPPTSQC 105


Top