BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025037
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   147   7e-34
ref|XP_002510888.1| pentatricopeptide repeat-containing protein,...   147   9e-34
emb|CBI31865.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/110 (64%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQA-GGFVVKPDKITVASVISACAS 153
           +FR+M  RN+I+WNSIITG  Q G  K +L LFHEMQ     +VKPDKIT+ASV+SACA 
Sbjct: 214 LFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQ 273

Query: 152 LGAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEMP 3
           LGA D G+WVHGYL+  GIE DVVIGTAL++MYGKCG + +A E+F+EMP
Sbjct: 274 LGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMP 323


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/111 (62%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQ--AGGFVVKPDKITVASVISACA 156
           +FR+M  RN+I+WNSIITG VQ G  K +L +FHEMQ  +G  VVKPDKIT+ASV+SACA
Sbjct: 217 LFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACA 276

Query: 155 SLGAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEMP 3
            LG+ D G+WVH YL+   IE DVVIGTAL++MYGKCG + +A+E+F++MP
Sbjct: 277 LLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMP 327


>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/115 (66%), Positives = 88/115 (76%), Gaps = 7/115 (6%)
 Frame = -1

Query: 329 VFRRMG-DRNVISWNSIITGFVQCGREKAALSLFHEMQA----GGF--VVKPDKITVASV 171
           +FR+M  +RNVI+WNSIITGFVQ GR K AL  FHEMQ      G    V+PDKIT+ASV
Sbjct: 196 LFRKMKINRNVITWNSIITGFVQGGRPKEALEFFHEMQCLRDDDGINNKVRPDKITIASV 255

Query: 170 ISACASLGAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEM 6
           +SACA LGA D G+WVH YL+  G+E D+VIGTAL+DMYGKCGCL RA EVF EM
Sbjct: 256 LSACAHLGAIDHGKWVHSYLRRSGLECDMVIGTALVDMYGKCGCLQRAYEVFREM 310



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/95 (33%), Positives = 54/95 (56%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQAGGFVVKPDKITVASVISACASL 150
           VFR M +++ ++W ++I+ F   G  K A  +F+EM+AGG  VKP+ +T   ++SACA  
Sbjct: 306 VFREMSEKDTLAWTAMISVFALNGFGKEAFDMFNEMEAGG--VKPNLVTFVGLLSACAHS 363

Query: 149 GAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKC 45
           G  + GR    ++ +C +E     G   +  + KC
Sbjct: 364 GLVETGR-CPNWITVCDLE-----GPTKVLAWSKC 392


>emb|CBI31865.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/109 (54%), Positives = 81/109 (74%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQAGGFVVKPDKITVASVISACASL 150
           +F  + DR+++SW SII+G VQC + K +L LF++MQ  G  V+PD+I + SV+SACASL
Sbjct: 260 LFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISG--VEPDRIILTSVLSACASL 317

Query: 149 GAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEMP 3
           GA D GRWV  Y++  GIE D+ IGTAL+DMY KCGC+  AL +F+ +P
Sbjct: 318 GALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP 366



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/109 (39%), Positives = 64/109 (58%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQAGGFVVKPDKITVASVISACASL 150
           VF  M  R+V+SW  +I+G+V+ G    A++LF +M      V P+  T  SV+ AC  +
Sbjct: 162 VFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMD-----VVPNVATFVSVLVACGRM 216

Query: 149 GAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEMP 3
           G    G+ VHG +      + +V+G AL+DMY KC CL  A ++FDE+P
Sbjct: 217 GYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELP 265


>ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/109 (54%), Positives = 81/109 (74%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQAGGFVVKPDKITVASVISACASL 150
           +F  + DR+++SW SII+G VQC + K +L LF++MQ  G  V+PD+I + SV+SACASL
Sbjct: 260 LFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISG--VEPDRIILTSVLSACASL 317

Query: 149 GAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEMP 3
           GA D GRWV  Y++  GIE D+ IGTAL+DMY KCGC+  AL +F+ +P
Sbjct: 318 GALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP 366



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/109 (39%), Positives = 64/109 (58%)
 Frame = -1

Query: 329 VFRRMGDRNVISWNSIITGFVQCGREKAALSLFHEMQAGGFVVKPDKITVASVISACASL 150
           VF  M  R+V+SW  +I+G+V+ G    A++LF +M      V P+  T  SV+ AC  +
Sbjct: 162 VFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMD-----VVPNVATFVSVLVACGRM 216

Query: 149 GAFDQGRWVHGYLKLCGIELDVVIGTALIDMYGKCGCLARALEVFDEMP 3
           G    G+ VHG +      + +V+G AL+DMY KC CL  A ++FDE+P
Sbjct: 217 GYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELP 265