BLASTX nr result

ID: Dioscorea21_contig00025005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025005
         (1823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              640   0.0  
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   640   0.0  
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   624   e-176
ref|XP_003576845.1| PREDICTED: ruBisCO large subunit-binding pro...   613   e-173
ref|XP_002459819.1| hypothetical protein SORBIDRAFT_02g011260 [S...   611   e-172

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  640 bits (1650), Expect = 0.0
 Identities = 326/470 (69%), Positives = 388/470 (82%)
 Frame = -3

Query: 1818 LLQEVASKTNDSAGDGTTTAIILAREMINSGMLAVASGANPVSLKKGIERAVSEVVLILK 1639
            L+QEVASKTND AGDGTTTAIILAREMI SG+L VA GANP+ LKKG+++ V E+V +LK
Sbjct: 114  LMQEVASKTNDVAGDGTTTAIILAREMIKSGLLVVAFGANPIGLKKGMDKTVRELVKVLK 173

Query: 1638 SKCCPVSGIRDIQAVASISSGNDEFVGNLIAEAIDRXXXXXXXXXXXXXSFDTTIEVQEG 1459
             K  PV G  DI+AVASIS+GND+FVGNLIAEAID+             S +T++ ++EG
Sbjct: 174  KKSFPVKGRDDIRAVASISAGNDDFVGNLIAEAIDKIGPDGVISIESSSSSETSVIIEEG 233

Query: 1458 MKIDKGYMSPHFVTNQDKSIVEFQNAKVLVTDQKVTSVKYIIPLLEKTIQLSVPLLIIAE 1279
            MKIDKGYMSPHF+TNQDKSIVEF+NAKVLVTDQK++++K I+PLLEKT QLSVPLLIIAE
Sbjct: 234  MKIDKGYMSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAE 293

Query: 1278 DISREVLATLVMNKLNGVINVAAIKCPGFGEGKKALLQDIALMTGADFLASDLGLTLEDV 1099
            DIS +VL TLV+NK+ G+INVA +KCPGFGEGKKALLQDIAL+TGADFL+ DLGLTL+  
Sbjct: 294  DISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSA 353

Query: 1098 TSDQLGIAEKITITSDSTTIVADPSTRAEIQARISQIKKDLAEADGAYLTRKLSERIAKL 919
            TSDQLGIA K+TITS+STT VADPST+ EIQARI QIKKDLAE D +YL+RKLSERIAKL
Sbjct: 354  TSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKL 413

Query: 918  SSGVAVIKVGAHTEAELEDRKLRIEDAKHATYXXXXXXXXXXXXATYVQLSKNIPAIMDQ 739
            S GVA+IKVGAHTE ELEDRKLRIEDAK+AT+            ATY+ L + IP I   
Sbjct: 414  SGGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHS 473

Query: 738  IEDPDEKIGADIVRKALLIPASSIAANAGVDGSVVVEKLLANEWKFGYNAMSGKYEDLLA 559
            +EDPDE+IGADIV KAL  PA +IA NAGVDG+VV+EK+   +W+ GY+AM+G+Y+DLL 
Sbjct: 474  MEDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLN 533

Query: 558  SGVIDPCKVTRCALQNAASIAGVVLMTQAVLVDKIKKPKPAVPLVPGINP 409
            +GV+DPC+V+RCALQNA S+AG+VL TQAVLV+K K PK AVP +PGI P
Sbjct: 534  AGVVDPCRVSRCALQNAVSVAGIVLTTQAVLVEKTKPPKSAVPRLPGITP 583


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
            vinifera]
          Length = 602

 Score =  640 bits (1650), Expect = 0.0
 Identities = 326/470 (69%), Positives = 388/470 (82%)
 Frame = -3

Query: 1818 LLQEVASKTNDSAGDGTTTAIILAREMINSGMLAVASGANPVSLKKGIERAVSEVVLILK 1639
            L+QEVASKTND AGDGTTTAIILAREMI SG+L VA GANP+ LKKG+++ V E+V +LK
Sbjct: 133  LMQEVASKTNDVAGDGTTTAIILAREMIKSGLLVVAFGANPIGLKKGMDKTVRELVKVLK 192

Query: 1638 SKCCPVSGIRDIQAVASISSGNDEFVGNLIAEAIDRXXXXXXXXXXXXXSFDTTIEVQEG 1459
             K  PV G  DI+AVASIS+GND+FVGNLIAEAID+             S +T++ ++EG
Sbjct: 193  KKSFPVKGRDDIRAVASISAGNDDFVGNLIAEAIDKIGPDGVISIESSSSSETSVIIEEG 252

Query: 1458 MKIDKGYMSPHFVTNQDKSIVEFQNAKVLVTDQKVTSVKYIIPLLEKTIQLSVPLLIIAE 1279
            MKIDKGYMSPHF+TNQDKSIVEF+NAKVLVTDQK++++K I+PLLEKT QLSVPLLIIAE
Sbjct: 253  MKIDKGYMSPHFITNQDKSIVEFENAKVLVTDQKISTIKGIVPLLEKTTQLSVPLLIIAE 312

Query: 1278 DISREVLATLVMNKLNGVINVAAIKCPGFGEGKKALLQDIALMTGADFLASDLGLTLEDV 1099
            DIS +VL TLV+NK+ G+INVA +KCPGFGEGKKALLQDIAL+TGADFL+ DLGLTL+  
Sbjct: 313  DISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGADFLSGDLGLTLDSA 372

Query: 1098 TSDQLGIAEKITITSDSTTIVADPSTRAEIQARISQIKKDLAEADGAYLTRKLSERIAKL 919
            TSDQLGIA K+TITS+STT VADPST+ EIQARI QIKKDLAE D +YL+RKLSERIAKL
Sbjct: 373  TSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSSYLSRKLSERIAKL 432

Query: 918  SSGVAVIKVGAHTEAELEDRKLRIEDAKHATYXXXXXXXXXXXXATYVQLSKNIPAIMDQ 739
            S GVA+IKVGAHTE ELEDRKLRIEDAK+AT+            ATY+ L + IP I   
Sbjct: 433  SGGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHS 492

Query: 738  IEDPDEKIGADIVRKALLIPASSIAANAGVDGSVVVEKLLANEWKFGYNAMSGKYEDLLA 559
            +EDPDE+IGADIV KAL  PA +IA NAGVDG+VV+EK+   +W+ GY+AM+G+Y+DLL 
Sbjct: 493  MEDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLN 552

Query: 558  SGVIDPCKVTRCALQNAASIAGVVLMTQAVLVDKIKKPKPAVPLVPGINP 409
            +GV+DPC+V+RCALQNA S+AG+VL TQAVLV+K K PK AVP +PGI P
Sbjct: 553  AGVVDPCRVSRCALQNAVSVAGIVLTTQAVLVEKTKPPKSAVPRLPGITP 602


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
            subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis]
          Length = 556

 Score =  624 bits (1608), Expect = e-176
 Identities = 319/471 (67%), Positives = 388/471 (82%)
 Frame = -3

Query: 1821 MLLQEVASKTNDSAGDGTTTAIILAREMINSGMLAVASGANPVSLKKGIERAVSEVVLIL 1642
            ML+QEVA+K ND AGDGTTTAIILAR MI  G+LAVA GANPVSL+KG++  + E+V +L
Sbjct: 86   MLIQEVANKMNDLAGDGTTTAIILARAMIKMGLLAVAFGANPVSLRKGLDMTIKELVEVL 145

Query: 1641 KSKCCPVSGIRDIQAVASISSGNDEFVGNLIAEAIDRXXXXXXXXXXXXXSFDTTIEVQE 1462
            K K   V+G  +I+AVASIS+GNDEFVGNLIAE ID+             + +T + ++E
Sbjct: 146  KEKSVSVTGRDNIKAVASISAGNDEFVGNLIAETIDKIGNDGVISIESSSTSETYVIIEE 205

Query: 1461 GMKIDKGYMSPHFVTNQDKSIVEFQNAKVLVTDQKVTSVKYIIPLLEKTIQLSVPLLIIA 1282
            GMKIDKGYMSP F+TNQ+KS+VEF NA+VLVTDQ++ +VK I+PLLEKT+QLSVPLLI A
Sbjct: 206  GMKIDKGYMSPQFITNQEKSLVEFNNARVLVTDQRIATVKEIVPLLEKTMQLSVPLLIFA 265

Query: 1281 EDISREVLATLVMNKLNGVINVAAIKCPGFGEGKKALLQDIALMTGADFLASDLGLTLED 1102
            ED+S++VL TLV+NK+ G++NVA +KCPGFGEGKKALLQDIALMTGADFL+ D GLTL  
Sbjct: 266  EDMSKQVLETLVVNKMQGLLNVAVVKCPGFGEGKKALLQDIALMTGADFLSGDFGLTLMG 325

Query: 1101 VTSDQLGIAEKITITSDSTTIVADPSTRAEIQARISQIKKDLAEADGAYLTRKLSERIAK 922
             TSDQLGIA+K+TITS+STTIVAD ST+AEIQARI Q+KKDLAE D  YL+RKLSERIAK
Sbjct: 326  ATSDQLGIAQKVTITSNSTTIVADSSTKAEIQARILQMKKDLAETDNKYLSRKLSERIAK 385

Query: 921  LSSGVAVIKVGAHTEAELEDRKLRIEDAKHATYXXXXXXXXXXXXATYVQLSKNIPAIMD 742
            LS GVA+IKVGAHTE ELEDRKLRIEDAK+ATY            A YV LS+ I  I D
Sbjct: 386  LSGGVALIKVGAHTETELEDRKLRIEDAKNATYAAMDEGIVPGGGAAYVHLSEQISTIQD 445

Query: 741  QIEDPDEKIGADIVRKALLIPASSIAANAGVDGSVVVEKLLANEWKFGYNAMSGKYEDLL 562
             +ED +E+IGADIV KALL+PA +IA NAGVDG+VVVEK+ +++W+ G+NAM+G+YEDLL
Sbjct: 446  SMEDENEQIGADIVAKALLVPAKTIATNAGVDGAVVVEKIRSSDWRIGFNAMTGEYEDLL 505

Query: 561  ASGVIDPCKVTRCALQNAASIAGVVLMTQAVLVDKIKKPKPAVPLVPGINP 409
             +GV+DPC+V+RCALQ+AASIAG+VL TQA+LV++ KKPKPAVP VPGI P
Sbjct: 506  DAGVVDPCRVSRCALQSAASIAGLVLTTQAILVERTKKPKPAVPHVPGITP 556


>ref|XP_003576845.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Brachypodium distachyon]
          Length = 590

 Score =  613 bits (1580), Expect = e-173
 Identities = 309/471 (65%), Positives = 384/471 (81%)
 Frame = -3

Query: 1821 MLLQEVASKTNDSAGDGTTTAIILAREMINSGMLAVASGANPVSLKKGIERAVSEVVLIL 1642
            MLLQEVASKTN + GDGTTTAIILARE+IN G+LAVA+GANPV+L+KGI++AV E++ IL
Sbjct: 113  MLLQEVASKTNSTVGDGTTTAIILAREIINLGLLAVANGANPVALRKGIDKAVHELIGIL 172

Query: 1641 KSKCCPVSGIRDIQAVASISSGNDEFVGNLIAEAIDRXXXXXXXXXXXXXSFDTTIEVQE 1462
            K+KC PVS   DI+AVASIS+GNDE+VGNLIA+A+++             S  TT+EVQE
Sbjct: 173  KTKCIPVSTKEDIKAVASISAGNDEYVGNLIADALEKIGPDGIIKIESSSSIYTTVEVQE 232

Query: 1461 GMKIDKGYMSPHFVTNQDKSIVEFQNAKVLVTDQKVTSVKYIIPLLEKTIQLSVPLLIIA 1282
            GMKIDKGY+SPHF+TN DK+IVEF+NA+VL+TDQ+V  ++ I+PLLEKT QLSVPLLIIA
Sbjct: 233  GMKIDKGYISPHFITNPDKAIVEFENARVLLTDQRVNEIQEILPLLEKTTQLSVPLLIIA 292

Query: 1281 EDISREVLATLVMNKLNGVINVAAIKCPGFGEGKKALLQDIALMTGADFLASDLGLTLED 1102
            ED+S  V +TLV+NKLNG++NVA +KCPG G+ KKA+LQDIA+MTGADF  SDLG  L+ 
Sbjct: 293  EDVSHTVYSTLVLNKLNGLLNVAVVKCPGLGDEKKAILQDIAIMTGADFFVSDLGWGLQA 352

Query: 1101 VTSDQLGIAEKITITSDSTTIVADPSTRAEIQARISQIKKDLAEADGAYLTRKLSERIAK 922
            +TSDQLG+A+KITITS+STTI+A PS R EI+ARI Q+KKDL E   AYL  + S RIAK
Sbjct: 353  ITSDQLGMAQKITITSESTTIIAHPSMRPEIEARIMQLKKDLEETTSAYLKERFSARIAK 412

Query: 921  LSSGVAVIKVGAHTEAELEDRKLRIEDAKHATYXXXXXXXXXXXXATYVQLSKNIPAIMD 742
            LS GVAVIKVGA TEAELEDRKLR+EDAK+AT+             TYVQLSK+IP+IMD
Sbjct: 413  LSRGVAVIKVGAATEAELEDRKLRVEDAKNATFAAISEGIAPGGGVTYVQLSKHIPSIMD 472

Query: 741  QIEDPDEKIGADIVRKALLIPASSIAANAGVDGSVVVEKLLANEWKFGYNAMSGKYEDLL 562
             ++DP+EKIG +IV KALL+PA  IA NAG DGS +VEKLL +EW+ GYNAM+ K+EDL+
Sbjct: 473  LVDDPEEKIGVNIVGKALLVPAMMIARNAGADGSAIVEKLLESEWRVGYNAMTDKFEDLV 532

Query: 561  ASGVIDPCKVTRCALQNAASIAGVVLMTQAVLVDKIKKPKPAVPLVPGINP 409
             +GV+DPC+V RC LQN+ASI+G++LMTQA++ DKIKK K  +P +PG+ P
Sbjct: 533  DAGVVDPCRVARCVLQNSASISGLILMTQAMMFDKIKKKKSPIPEIPGLPP 583


>ref|XP_002459819.1| hypothetical protein SORBIDRAFT_02g011260 [Sorghum bicolor]
            gi|241923196|gb|EER96340.1| hypothetical protein
            SORBIDRAFT_02g011260 [Sorghum bicolor]
          Length = 585

 Score =  611 bits (1575), Expect = e-172
 Identities = 307/470 (65%), Positives = 385/470 (81%)
 Frame = -3

Query: 1818 LLQEVASKTNDSAGDGTTTAIILAREMINSGMLAVASGANPVSLKKGIERAVSEVVLILK 1639
            LLQE+ASKTN + GDGTTTAI+LARE+IN G+LAVA+GANPV+L++GI++AV E++ ILK
Sbjct: 107  LLQEIASKTNSAVGDGTTTAIVLAREIINLGLLAVATGANPVALRRGIDKAVHELIKILK 166

Query: 1638 SKCCPVSGIRDIQAVASISSGNDEFVGNLIAEAIDRXXXXXXXXXXXXXSFDTTIEVQEG 1459
            SKC PVS   DI+AVASISSGNDE+VGNLIA+A+++             S  TT+EVQEG
Sbjct: 167  SKCIPVSTKEDIKAVASISSGNDEYVGNLIADAMEKIGPDGIIKIESSSSIYTTVEVQEG 226

Query: 1458 MKIDKGYMSPHFVTNQDKSIVEFQNAKVLVTDQKVTSVKYIIPLLEKTIQLSVPLLIIAE 1279
            MKIDKGY+SP+F+TNQDK+IVEF+NA+VL+TDQ+V  V+ I+PLLEKT QLSVPLLIIAE
Sbjct: 227  MKIDKGYVSPYFITNQDKAIVEFENARVLLTDQRVNEVQEILPLLEKTTQLSVPLLIIAE 286

Query: 1278 DISREVLATLVMNKLNGVINVAAIKCPGFGEGKKALLQDIALMTGADFLASDLGLTLEDV 1099
            D+S EV +TLV+NKLNG++NVA +KCPG G+ KKA+LQDIA+MTGADF ASDLG  L  +
Sbjct: 287  DVSHEVYSTLVLNKLNGLLNVAVVKCPGLGDEKKAILQDIAIMTGADFFASDLGWGLHGI 346

Query: 1098 TSDQLGIAEKITITSDSTTIVADPSTRAEIQARISQIKKDLAEADGAYLTRKLSERIAKL 919
            TSDQLG+A+KITITS+STTI+A PS R EI+ARI Q+KKDL E   +YL  + S RIAKL
Sbjct: 347  TSDQLGMAQKITITSESTTIIAHPSMRPEIEARIMQLKKDLEETTSSYLKERFSARIAKL 406

Query: 918  SSGVAVIKVGAHTEAELEDRKLRIEDAKHATYXXXXXXXXXXXXATYVQLSKNIPAIMDQ 739
            S GV VIKVGA TEAELEDRKLR+EDAK+AT+             TYV LSK+IP+IMD 
Sbjct: 407  SRGVGVIKVGAATEAELEDRKLRVEDAKNATFAAISEGITPGGGVTYVHLSKHIPSIMDL 466

Query: 738  IEDPDEKIGADIVRKALLIPASSIAANAGVDGSVVVEKLLANEWKFGYNAMSGKYEDLLA 559
            ++D +EK+G +IV KALL+PA +IA NAG +G  VVEKLLA+EW+ GYNAM+G++EDL+A
Sbjct: 467  VDDAEEKMGVNIVGKALLVPAMTIARNAGAEGPAVVEKLLASEWRVGYNAMTGEFEDLVA 526

Query: 558  SGVIDPCKVTRCALQNAASIAGVVLMTQAVLVDKIKKPKPAVPLVPGINP 409
            +GV+DPC+V RC LQN+ASIAG++LMTQA++ DK+KK K  +P +PGI P
Sbjct: 527  AGVVDPCRVARCVLQNSASIAGLILMTQAMMFDKVKKKKSPIPDIPGIPP 576


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