BLASTX nr result

ID: Dioscorea21_contig00024482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024482
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466578.1| hypothetical protein SORBIDRAFT_01g010310 [S...    67   1e-09
dbj|BAK03894.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   6e-09
ref|NP_001051062.1| Os03g0712200 [Oryza sativa Japonica Group] g...    64   1e-08
gb|EEE59800.1| hypothetical protein OsJ_12324 [Oryza sativa Japo...    64   1e-08
gb|ACR35232.1| unknown [Zea mays]                                      63   2e-08

>ref|XP_002466578.1| hypothetical protein SORBIDRAFT_01g010310 [Sorghum bicolor]
           gi|241920432|gb|EER93576.1| hypothetical protein
           SORBIDRAFT_01g010310 [Sorghum bicolor]
          Length = 436

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
 Frame = -1

Query: 463 KWRYDQRTPQSGDEKPDFWSEEDENMNSSD-------KVFEF-DDFPIVGGKSAVSQNPL 308
           +W+  Q++    DE  DFWS +DE  +S D       K + F D FPIVGG++A SQ+ L
Sbjct: 315 RWQSPQKSASPSDEDSDFWSADDEGGDSRDNDALLQQKDYRFLDSFPIVGGRTANSQDRL 374

Query: 307 LRERWKEEMLNKSQGTLDARSDEKDSGLNFASFSGAEELNEXXXXXXDIAAWF 149
            RE+WK+EM  +++G     S E     +      + EL E      DIA+WF
Sbjct: 375 AREKWKDEMSRRNKGLQTKESQESVRPCSPGRLPRSMELVE---SDDDIASWF 424


>dbj|BAK03894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 217

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
 Frame = -1

Query: 448 QRTPQSGDEKPDFWSEEDENMNSSD--------KVFEF-DDFPIVGGKSAVSQNPLLRER 296
           +R P S DE  DFWS E+E  ++S+        + ++F D FPI GG++A+SQ PL RE+
Sbjct: 100 KRAPLS-DEDSDFWSSEEEGDDNSENNSMLPMHRDYKFLDSFPIAGGRTAISQEPLEREK 158

Query: 295 WKEEMLNKSQGTLDARSDEKDSGLNFASFSGAEELNEXXXXXXDIAAWFKCRGDNTSK 122
           WKEEM   +QG    R   + S  +      + E+ E      +I++WF   G N+++
Sbjct: 159 WKEEMSRGNQGL--PREATEGSNRSSVRVPRSMEMAESDDDDDEISSWFS--GGNSNR 212


>ref|NP_001051062.1| Os03g0712200 [Oryza sativa Japonica Group]
           gi|13324787|gb|AAK18835.1|AC082645_5 hypothetical
           protein [Oryza sativa Japonica Group]
           gi|108710727|gb|ABF98522.1| zinc finger family protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549533|dbj|BAF12976.1| Os03g0712200 [Oryza sativa
           Japonica Group] gi|125545478|gb|EAY91617.1| hypothetical
           protein OsI_13252 [Oryza sativa Indica Group]
           gi|215704402|dbj|BAG93836.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215706487|dbj|BAG93343.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 523

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
 Frame = -1

Query: 427 DEKPDFWSEEDENMNSSDKVFE--------FDDFPIVGGKSAVSQNPLLRERWKEEMLNK 272
           DE  DFWS E+E    SDK            + FPI+GG++A+SQ+PL RE+WK+EM  +
Sbjct: 410 DEDSDFWSSEEEGAYHSDKNIPPIKKDYKFLESFPIIGGRTAMSQDPLEREKWKDEMSRR 469

Query: 271 SQGTLDARSDEKD 233
           ++G L   S+E +
Sbjct: 470 NKGLLTEVSEESN 482


>gb|EEE59800.1| hypothetical protein OsJ_12324 [Oryza sativa Japonica Group]
          Length = 485

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
 Frame = -1

Query: 427 DEKPDFWSEEDENMNSSDKVFE--------FDDFPIVGGKSAVSQNPLLRERWKEEMLNK 272
           DE  DFWS E+E    SDK            + FPI+GG++A+SQ+PL RE+WK+EM  +
Sbjct: 372 DEDSDFWSSEEEGAYHSDKNIPPIKKDYKFLESFPIIGGRTAMSQDPLEREKWKDEMSRR 431

Query: 271 SQGTLDARSDEKD 233
           ++G L   S+E +
Sbjct: 432 NKGLLTEVSEESN 444


>gb|ACR35232.1| unknown [Zea mays]
          Length = 181

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
 Frame = -1

Query: 460 WRYDQRTPQSGDEKPDFWSEEDENMNSSD-------KVFEF-DDFPIVGGKSAVSQNPLL 305
           W+  Q+     D   DFWS +DE   S D       K + F + FPIVGG++A SQ+ L 
Sbjct: 60  WQSLQKKGSPSDTDLDFWSADDEEGGSRDNDTLLRQKDYRFLESFPIVGGRTANSQDLLA 119

Query: 304 RERWKEEMLNKSQGTLDARSDEKDSGLNFASFSGAEELNEXXXXXXDIAAWFKCRGDNTS 125
           RE+WK+EM  +++G     S E +   +      + EL +      DIA+WF   GDN +
Sbjct: 120 REKWKDEMSRRNKGLQTTESQESNRPSSHCRLPRSMELVD---SDDDIASWFS-GGDNNN 175

Query: 124 K 122
           +
Sbjct: 176 R 176


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