BLASTX nr result

ID: Dioscorea21_contig00024481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024481
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA36743.1| TPA: 3-isopropylmalate dehydrogenase [Zea mays]        80   1e-13
ref|NP_001150956.1| LOC100284589 [Zea mays] gi|195643202|gb|ACG4...    80   1e-13
ref|XP_002447363.1| hypothetical protein SORBIDRAFT_06g033720 [S...    80   2e-13
ref|XP_002889286.1| hypothetical protein ARALYDRAFT_477193 [Arab...    79   4e-13
ref|XP_003580860.1| PREDICTED: 3-isopropylmalate dehydrogenase 2...    78   7e-13

>tpg|DAA36743.1| TPA: 3-isopropylmalate dehydrogenase [Zea mays]
          Length = 407

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = +1

Query: 67  AALQASLRPLKAISLATNPSTSRSTTARKFV-SFRCSVAASVASRGYSITLLPGDGIGPE 243
           AALQA+  PLK +S++           R    SFRCS AA    R Y+ITLLPGDGIGPE
Sbjct: 3   AALQAT--PLKTLSISRRRVGGAGARPRPMAASFRCSAAA----RSYNITLLPGDGIGPE 56

Query: 244 VVSVAKDALALAGSYEGIEFRFRE 315
           VV+VAKD L+LAG+ EG+E RF+E
Sbjct: 57  VVAVAKDVLSLAGALEGVELRFQE 80


>ref|NP_001150956.1| LOC100284589 [Zea mays] gi|195643202|gb|ACG41069.1|
           3-isopropylmalate dehydrogenase 2 [Zea mays]
          Length = 407

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = +1

Query: 67  AALQASLRPLKAISLATNPSTSRSTTARKFV-SFRCSVAASVASRGYSITLLPGDGIGPE 243
           AALQA+  PLK +S++           R    SFRCS AA    R Y+ITLLPGDGIGPE
Sbjct: 3   AALQAT--PLKTLSISRRRVGGAGARPRPMAASFRCSAAA----RSYNITLLPGDGIGPE 56

Query: 244 VVSVAKDALALAGSYEGIEFRFRE 315
           VV+VAKD L+LAG+ EG+E RF+E
Sbjct: 57  VVAVAKDVLSLAGALEGVELRFQE 80


>ref|XP_002447363.1| hypothetical protein SORBIDRAFT_06g033720 [Sorghum bicolor]
           gi|241938546|gb|EES11691.1| hypothetical protein
           SORBIDRAFT_06g033720 [Sorghum bicolor]
          Length = 407

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = +1

Query: 67  AALQASLRPLKAISLATNPSTSRSTTARKFV-SFRCSVAASVASRGYSITLLPGDGIGPE 243
           AALQA+  PLK ++++           R  V SFRCS AA    R Y+ITLLPGDGIGPE
Sbjct: 3   AALQAT--PLKTLAISRRRVGVAGVRQRPMVASFRCSAAA----RSYNITLLPGDGIGPE 56

Query: 244 VVSVAKDALALAGSYEGIEFRFRE 315
           VV+VAKD L+LAG+ EG+E RF+E
Sbjct: 57  VVAVAKDVLSLAGALEGVELRFQE 80


>ref|XP_002889286.1| hypothetical protein ARALYDRAFT_477193 [Arabidopsis lyrata subsp.
           lyrata] gi|297335127|gb|EFH65545.1| hypothetical protein
           ARALYDRAFT_477193 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +1

Query: 67  AALQASLRPLKAISLATNPSTSRSTTARKFVSFRCSVA-ASVASRGYSITLLPGDGIGPE 243
           AALQ ++ P+K       P+T R+   + F  FR   A AS  ++ Y+ITLLPGDGIGPE
Sbjct: 3   AALQTNIPPVKV------PATFRAVKKQSFAPFRVRCAVASPGNKRYNITLLPGDGIGPE 56

Query: 244 VVSVAKDALALAGSYEGIEFRFRE 315
           VVS+AK+ L  AGS EG+EF FRE
Sbjct: 57  VVSIAKNVLQQAGSLEGVEFSFRE 80


>ref|XP_003580860.1| PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 403

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/75 (56%), Positives = 52/75 (69%)
 Frame = +1

Query: 91  PLKAISLATNPSTSRSTTARKFVSFRCSVAASVASRGYSITLLPGDGIGPEVVSVAKDAL 270
           PLK + L    S++R  T R    FRC+ +A    R Y+ITLLPGDGIGPEVV+VAKD L
Sbjct: 9   PLKTLGL----SSARRGTGRPMAPFRCAASA----RSYNITLLPGDGIGPEVVAVAKDVL 60

Query: 271 ALAGSYEGIEFRFRE 315
           + AGS EG+E RF+E
Sbjct: 61  STAGSKEGVELRFQE 75


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