BLASTX nr result

ID: Dioscorea21_contig00024469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024469
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568300.1| CCT motif family protein [Arabidopsis thaliana]...    77   1e-12
gb|AAM63153.1| unknown [Arabidopsis thaliana]                          77   1e-12
ref|XP_002873661.1| hypothetical protein ARALYDRAFT_488277 [Arab...    77   2e-12
ref|XP_003553886.1| PREDICTED: uncharacterized protein LOC100811...    76   2e-12
ref|XP_004156700.1| PREDICTED: uncharacterized LOC101217596 [Cuc...    75   4e-12

>ref|NP_568300.1| CCT motif family protein [Arabidopsis thaliana]
           gi|15292917|gb|AAK92829.1| unknown protein [Arabidopsis
           thaliana] gi|20259039|gb|AAM14235.1| unknown protein
           [Arabidopsis thaliana] gi|332004640|gb|AED92023.1| CCT
           motif family protein [Arabidopsis thaliana]
          Length = 339

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -1

Query: 210 RYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRKD 94
           RYKEKRQNRLFSKRIRY+VRKLNAEKRPR+KGRFVKR+D
Sbjct: 300 RYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRED 338


>gb|AAM63153.1| unknown [Arabidopsis thaliana]
          Length = 305

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -1

Query: 210 RYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRKD 94
           RYKEKRQNRLFSKRIRY+VRKLNAEKRPR+KGRFVKR+D
Sbjct: 266 RYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRED 304


>ref|XP_002873661.1| hypothetical protein ARALYDRAFT_488277 [Arabidopsis lyrata subsp.
           lyrata] gi|297319498|gb|EFH49920.1| hypothetical protein
           ARALYDRAFT_488277 [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -1

Query: 210 RYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRKD 94
           RYKEKRQNRLFSKRIRY+VRKLNAEKRPR+KGRFVKR D
Sbjct: 296 RYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRDD 334


>ref|XP_003553886.1| PREDICTED: uncharacterized protein LOC100811815 [Glycine max]
          Length = 349

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -1

Query: 213 RRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRK 97
           +RYKEKRQ+RLFSKRIRYEVRKLNAEKRPRMKGRFVKR+
Sbjct: 311 QRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE 349


>ref|XP_004156700.1| PREDICTED: uncharacterized LOC101217596 [Cucumis sativus]
          Length = 324

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -1

Query: 210 RYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKR 100
           RYKEKRQ+RLFSKRIRYEVRKLNAEKRPRMKGRFVKR
Sbjct: 287 RYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKR 323


Top