BLASTX nr result

ID: Dioscorea21_contig00024467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024467
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF69954.1| paxneb-related protein [Musa acuminata]                103   8e-27
ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like ...   100   1e-25
dbj|BAK06619.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   1e-24
ref|XP_002438727.1| hypothetical protein SORBIDRAFT_10g025080 [S...    97   2e-24
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]    98   2e-24

>gb|ABF69954.1| paxneb-related protein [Musa acuminata]
          Length = 291

 Score =  103 bits (257), Expect(2) = 8e-27
 Identities = 51/73 (69%), Positives = 59/73 (80%)
 Frame = -3

Query: 250 LARILGGGF*LGTVVMVMEDAETPHRLLLLRNFMVHGLVHRHPLLFASSSKEPRAILGTL 71
           L RILGGGF LG++VMVMEDA+ PH LLLLRNFM  G+VHR P+LFAS  ++PRA LGTL
Sbjct: 56  LDRILGGGFLLGSLVMVMEDADAPHHLLLLRNFMSQGVVHRQPVLFASPLRDPRAFLGTL 115

Query: 70  SSPVSGSKDERPR 32
            SPVS SK+ R R
Sbjct: 116 PSPVSSSKEHRQR 128



 Score = 42.4 bits (98), Expect(2) = 8e-27
 Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = -1

Query: 447 TAQASSFSRVTAAASAKLAIP---GVNHDLNGAAFVSSGIPDLD 325
           +A  SSFSR  ++ SA L  P   GV    NGA FVSSGIPDLD
Sbjct: 14  SANTSSFSRARSSPSAVLPSPPNPGVKLGPNGATFVSSGIPDLD 57


>ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like [Brachypodium
           distachyon]
          Length = 382

 Score =  100 bits (249), Expect(2) = 1e-25
 Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
 Frame = -3

Query: 250 LARILGGGF*LGTVVMVMEDAETPHRLLLLRNFMVHGLVHRHPLLFASSSKEPRAILGTL 71
           L RILGGGF LG+VVMVMED++ PH LLLLRNFM  G+VH+ PLLFA   KEPRA LG L
Sbjct: 53  LDRILGGGFLLGSVVMVMEDSDAPHHLLLLRNFMAQGVVHKQPLLFAGPMKEPRAFLGAL 112

Query: 70  SSPVSGSKDERPRMA--PGLDPDAQ 2
            +PV+ SK++  + A  PG   D +
Sbjct: 113 PAPVASSKEDARQRAIGPGATSDGR 137



 Score = 41.2 bits (95), Expect(2) = 1e-25
 Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -1

Query: 480 MAPVRRDGAGATAQASSFSRVTAA--ASAKLAIPGVNHDLNGAAFVSSGIPDLD 325
           MA       G     SSFSR  ++  AS+     GV    NGAAFVSSGIPDLD
Sbjct: 1   MAAAAAGTGGQALGRSSFSRAASSQTASSSSTASGVKLGPNGAAFVSSGIPDLD 54


>dbj|BAK06619.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 387

 Score = 95.9 bits (237), Expect(2) = 1e-24
 Identities = 47/77 (61%), Positives = 58/77 (75%)
 Frame = -3

Query: 250 LARILGGGF*LGTVVMVMEDAETPHRLLLLRNFMVHGLVHRHPLLFASSSKEPRAILGTL 71
           L RILGGGF LG+VVMVMED++ PH LLLLR FM  G+VH+ PLLFA+  KEPR  LG L
Sbjct: 57  LDRILGGGFLLGSVVMVMEDSDAPHHLLLLRAFMAQGVVHKQPLLFAAPMKEPRLFLGAL 116

Query: 70  SSPVSGSKDERPRMAPG 20
            +PV+ SK++  + A G
Sbjct: 117 PAPVASSKEDTRQRAMG 133



 Score = 42.7 bits (99), Expect(2) = 1e-24
 Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
 Frame = -1

Query: 453 GATAQASSFSRV----TAAASAKLAIPGVNHDLNGAAFVSSGIPDLD 325
           G T   SSFSR     TA++S+     GV    NGAAFVSSGIPDLD
Sbjct: 12  GQTLGRSSFSRAASSKTASSSSSPTASGVKLGPNGAAFVSSGIPDLD 58


>ref|XP_002438727.1| hypothetical protein SORBIDRAFT_10g025080 [Sorghum bicolor]
           gi|241916950|gb|EER90094.1| hypothetical protein
           SORBIDRAFT_10g025080 [Sorghum bicolor]
          Length = 373

 Score = 97.1 bits (240), Expect(2) = 2e-24
 Identities = 48/77 (62%), Positives = 58/77 (75%)
 Frame = -3

Query: 250 LARILGGGF*LGTVVMVMEDAETPHRLLLLRNFMVHGLVHRHPLLFASSSKEPRAILGTL 71
           L RILGGGF LG+VVM+MEDA+ PH LLLLR FM  G+VH+ PLLF+ + KEPR  LGTL
Sbjct: 48  LDRILGGGFLLGSVVMIMEDADAPHHLLLLRCFMSQGVVHKQPLLFSGAMKEPRLFLGTL 107

Query: 70  SSPVSGSKDERPRMAPG 20
            +PVS SK++    A G
Sbjct: 108 PAPVSSSKEDGRHRAMG 124



 Score = 40.8 bits (94), Expect(2) = 2e-24
 Identities = 24/44 (54%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -1

Query: 453 GATAQASSFSRVTA-AASAKLAIPGVNHDLNGAAFVSSGIPDLD 325
           G T   SSFSR T+   ++     GV    NGAAFVSSGIPDLD
Sbjct: 6   GRTLGRSSFSRATSNPVASSSGAAGVRIGPNGAAFVSSGIPDLD 49


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score = 97.8 bits (242), Expect(2) = 2e-24
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = -3

Query: 250 LARILGGGF*LGTVVMVMEDAETPHRLLLLRNFMVHGLVHRHPLLFASSSKEPRAILGTL 71
           L +ILGGGF LG++VMVMED E PH +LLLRNFM  GLVH  PLL+AS SK+PRA LGTL
Sbjct: 43  LDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTL 102

Query: 70  SSPVSGSKDER 38
            SPV  SKD+R
Sbjct: 103 PSPVL-SKDDR 112



 Score = 40.0 bits (92), Expect(2) = 2e-24
 Identities = 23/44 (52%), Positives = 27/44 (61%)
 Frame = -1

Query: 456 AGATAQASSFSRVTAAASAKLAIPGVNHDLNGAAFVSSGIPDLD 325
           A    + SSFSR T+ A A  A PG+    NG  F+SSGIPDLD
Sbjct: 2   AAMKTRMSSFSRNTSVAPAPQA-PGLKSGPNGTIFLSSGIPDLD 44


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