BLASTX nr result

ID: Dioscorea21_contig00024466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024466
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF69954.1| paxneb-related protein [Musa acuminata]                228   5e-58
ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like ...   211   8e-53
ref|NP_001058161.1| Os06g0639600 [Oryza sativa Japonica Group] g...   201   8e-50
dbj|BAK06619.1| predicted protein [Hordeum vulgare subsp. vulgare]    199   2e-49
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   197   7e-49

>gb|ABF69954.1| paxneb-related protein [Musa acuminata]
          Length = 291

 Score =  228 bits (581), Expect = 5e-58
 Identities = 112/148 (75%), Positives = 127/148 (85%)
 Frame = -1

Query: 446 PKPAIPGVKHGLNGAAFVSSGIPDLDRILGGGFQLGTVVMVMEDAEAPHHLLLLRNFMAQ 267
           P P  PGVK G NGA FVSSGIPDLDRILGGGF LG++VMVMEDA+APHHLLLLRNFM+Q
Sbjct: 32  PSPPNPGVKLGPNGATFVSSGIPDLDRILGGGFLLGSLVMVMEDADAPHHLLLLRNFMSQ 91

Query: 266 GLVHRHPLLFASPSKEPRAFLGTLPSPVSGSKDERPRVAPGLDPDAQDHDKGLRIAWQYK 87
           G+VHR P+LFASP ++PRAFLGTLPSPVS SK+ R R    +D + QD +KGLRIAWQYK
Sbjct: 92  GVVHRQPVLFASPLRDPRAFLGTLPSPVSSSKEHRQRDTL-VDHNQQDQEKGLRIAWQYK 150

Query: 86  KYFGEQQSSELHNRDCRQEFSNDFDLRK 3
           KYFG+QQSS+ HNRD +QEFSNDFDLRK
Sbjct: 151 KYFGDQQSSQNHNRDVKQEFSNDFDLRK 178


>ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like [Brachypodium
           distachyon]
          Length = 382

 Score =  211 bits (536), Expect = 8e-53
 Identities = 105/144 (72%), Positives = 121/144 (84%), Gaps = 2/144 (1%)
 Frame = -1

Query: 428 GVKHGLNGAAFVSSGIPDLDRILGGGFQLGTVVMVMEDAEAPHHLLLLRNFMAQGLVHRH 249
           GVK G NGAAFVSSGIPDLDRILGGGF LG+VVMVMED++APHHLLLLRNFMAQG+VH+ 
Sbjct: 35  GVKLGPNGAAFVSSGIPDLDRILGGGFLLGSVVMVMEDSDAPHHLLLLRNFMAQGVVHKQ 94

Query: 248 PLLFASPSKEPRAFLGTLPSPVSGSK-DERPR-VAPGLDPDAQDHDKGLRIAWQYKKYFG 75
           PLLFA P KEPRAFLG LP+PV+ SK D R R + PG   D +  D+GLRIAWQY+KYFG
Sbjct: 95  PLLFAGPMKEPRAFLGALPAPVASSKEDARQRAIGPGATSDGRASDEGLRIAWQYRKYFG 154

Query: 74  EQQSSELHNRDCRQEFSNDFDLRK 3
           E+++S   +RD +QEFSNDFDLRK
Sbjct: 155 EEKTSHAQHRDNKQEFSNDFDLRK 178


>ref|NP_001058161.1| Os06g0639600 [Oryza sativa Japonica Group]
           gi|51535593|dbj|BAD37537.1| Paxneb protein-like [Oryza
           sativa Japonica Group] gi|51536358|dbj|BAD37489.1|
           Paxneb protein-like [Oryza sativa Japonica Group]
           gi|113596201|dbj|BAF20075.1| Os06g0639600 [Oryza sativa
           Japonica Group] gi|222635954|gb|EEE66086.1| hypothetical
           protein OsJ_22107 [Oryza sativa Japonica Group]
          Length = 377

 Score =  201 bits (510), Expect = 8e-50
 Identities = 98/143 (68%), Positives = 116/143 (81%), Gaps = 1/143 (0%)
 Frame = -1

Query: 428 GVKHGLNGAAFVSSGIPDLDRILGGGFQLGTVVMVMEDAEAPHHLLLLRNFMAQGLVHRH 249
           GVK G NGAAFVSSGIPDLDRILGGGF +G+VVM+MED++APHHLLLLR+FMAQG+VH+ 
Sbjct: 31  GVKLGPNGAAFVSSGIPDLDRILGGGFLIGSVVMIMEDSDAPHHLLLLRSFMAQGVVHKQ 90

Query: 248 PLLFASPSKEPRAFLGTLPSPVSGSKDERPR-VAPGLDPDAQDHDKGLRIAWQYKKYFGE 72
           PLLFA P KEPR FLGTLP+  S  +D R R +  G   D +  D+ LRIAWQYKKYFGE
Sbjct: 91  PLLFAGPMKEPRLFLGTLPAVASSKEDGRQRGMGAGTSSDGRTSDEALRIAWQYKKYFGE 150

Query: 71  QQSSELHNRDCRQEFSNDFDLRK 3
           +++S   +RD +QEFSNDFDLRK
Sbjct: 151 EKTSHAEHRDNKQEFSNDFDLRK 173


>dbj|BAK06619.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 387

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/148 (68%), Positives = 119/148 (80%), Gaps = 2/148 (1%)
 Frame = -1

Query: 440 PAIPGVKHGLNGAAFVSSGIPDLDRILGGGFQLGTVVMVMEDAEAPHHLLLLRNFMAQGL 261
           P   GVK G NGAAFVSSGIPDLDRILGGGF LG+VVMVMED++APHHLLLLR FMAQG+
Sbjct: 35  PTASGVKLGPNGAAFVSSGIPDLDRILGGGFLLGSVVMVMEDSDAPHHLLLLRAFMAQGV 94

Query: 260 VHRHPLLFASPSKEPRAFLGTLPSPVSGSK-DERPR-VAPGLDPDAQDHDKGLRIAWQYK 87
           VH+ PLLFA+P KEPR FLG LP+PV+ SK D R R +  G   D +  D+GLRIAWQY+
Sbjct: 95  VHKQPLLFAAPMKEPRLFLGALPAPVASSKEDTRQRAMGGGAAADGRAGDEGLRIAWQYR 154

Query: 86  KYFGEQQSSELHNRDCRQEFSNDFDLRK 3
           KYFG+ ++S   +RD +QEFS+DFDLRK
Sbjct: 155 KYFGDDRNSSAEHRDNKQEFSHDFDLRK 182


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  197 bits (502), Expect = 7e-49
 Identities = 100/148 (67%), Positives = 117/148 (79%)
 Frame = -1

Query: 446 PKPAIPGVKHGLNGAAFVSSGIPDLDRILGGGFQLGTVVMVMEDAEAPHHLLLLRNFMAQ 267
           P P  PG+K G NG  F+SSGIPDLD+ILGGGF LG++VMVMED EAPHH+LLLRNFM+Q
Sbjct: 19  PAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQ 78

Query: 266 GLVHRHPLLFASPSKEPRAFLGTLPSPVSGSKDERPRVAPGLDPDAQDHDKGLRIAWQYK 87
           GLVH  PLL+ASPSK+PRAFLGTLPSPV  SKD+R   +   DP   + +KGLRIAWQYK
Sbjct: 79  GLVHNQPLLYASPSKDPRAFLGTLPSPVL-SKDDR---SHNRDP---EQEKGLRIAWQYK 131

Query: 86  KYFGEQQSSELHNRDCRQEFSNDFDLRK 3
           KYFGE Q +   +RD + E+ NDFDLRK
Sbjct: 132 KYFGEHQPNFDSHRDTKHEYCNDFDLRK 159


Top