BLASTX nr result

ID: Dioscorea21_contig00024427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024427
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275725.2| PREDICTED: protein SCAI isoform 1 [Vitis vin...    75   4e-12
emb|CBI33146.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_003632475.1| PREDICTED: protein SCAI isoform 2 [Vitis vin...    75   4e-12
ref|XP_002306293.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002309960.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002275725.2| PREDICTED: protein SCAI isoform 1 [Vitis vinifera]
          Length = 606

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 59/139 (42%), Positives = 77/139 (55%), Gaps = 25/139 (17%)
 Frame = +3

Query: 27  DNDVRRTRRATSEGGSPEVGQLLERAERKVTRVRDVL-----PNH--RKVISTYTDLWRF 185
           DN V RT RA           L+E A++K  RVRDV      PNH  +KV   YT LW++
Sbjct: 3   DNVVARTFRA-----------LVESADQKFARVRDVPTYGRGPNHYFQKVFKAYTRLWQY 51

Query: 186 *QGS-----DAGDQRD------------YF-PYLGANKARFLLESYVFYGAILSKGYFEV 311
            Q +     +AG QR             YF  Y+  ++ARFLLESY+FY AIL++GYF+ 
Sbjct: 52  QQENRSKLVEAGLQRWEIGEIASRIGQLYFGQYMRTSEARFLLESYIFYEAILNRGYFQG 111

Query: 312 ERGGSCYYPGLRFKELRFH 368
            + GS    G+RFKELRF+
Sbjct: 112 SK-GSMKDLGVRFKELRFY 129


>emb|CBI33146.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 59/139 (42%), Positives = 77/139 (55%), Gaps = 25/139 (17%)
 Frame = +3

Query: 27  DNDVRRTRRATSEGGSPEVGQLLERAERKVTRVRDVL-----PNH--RKVISTYTDLWRF 185
           DN V RT RA           L+E A++K  RVRDV      PNH  +KV   YT LW++
Sbjct: 3   DNVVARTFRA-----------LVESADQKFARVRDVPTYGRGPNHYFQKVFKAYTRLWQY 51

Query: 186 *QGS-----DAGDQRD------------YF-PYLGANKARFLLESYVFYGAILSKGYFEV 311
            Q +     +AG QR             YF  Y+  ++ARFLLESY+FY AIL++GYF+ 
Sbjct: 52  QQENRSKLVEAGLQRWEIGEIASRIGQLYFGQYMRTSEARFLLESYIFYEAILNRGYFQG 111

Query: 312 ERGGSCYYPGLRFKELRFH 368
            + GS    G+RFKELRF+
Sbjct: 112 SK-GSMKDLGVRFKELRFY 129


>ref|XP_003632475.1| PREDICTED: protein SCAI isoform 2 [Vitis vinifera]
           gi|297741831|emb|CBI33144.3| unnamed protein product
           [Vitis vinifera]
          Length = 606

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 59/139 (42%), Positives = 77/139 (55%), Gaps = 25/139 (17%)
 Frame = +3

Query: 27  DNDVRRTRRATSEGGSPEVGQLLERAERKVTRVRDVL-----PNH--RKVISTYTDLWRF 185
           DN V RT RA           L+E A++K  RVRDV      PNH  +KV   YT LW++
Sbjct: 3   DNVVARTFRA-----------LVESADQKFARVRDVPTYGRGPNHYFQKVFKAYTRLWQY 51

Query: 186 *QGS-----DAGDQRD------------YF-PYLGANKARFLLESYVFYGAILSKGYFEV 311
            Q +     +AG QR             YF  Y+  ++ARFLLESY+FY AIL++GYF+ 
Sbjct: 52  QQENRLKLVEAGLQRWEIGEIASRIGQLYFGQYMRTSEARFLLESYIFYEAILNRGYFQG 111

Query: 312 ERGGSCYYPGLRFKELRFH 368
            + GS    G+RFKELRF+
Sbjct: 112 SK-GSMKDLGVRFKELRFY 129


>ref|XP_002306293.1| predicted protein [Populus trichocarpa] gi|222855742|gb|EEE93289.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 48/121 (39%), Positives = 64/121 (52%), Gaps = 28/121 (23%)
 Frame = +3

Query: 90  LLERAERKVTRVRDVLP-------NH--RKVISTYTDLWRF*QGS-----DAG------- 206
           L+E A+RK  RVRD LP       NH  +KV   Y  LW++ Q +     D+G       
Sbjct: 16  LVESADRKFARVRD-LPLYGRSPQNHYFQKVFKAYMRLWKYQQDNRSKLVDSGLNRWEIG 74

Query: 207 ------DQRDYFPYLGANKARFLLESYVFYGAILSKGYFEVERGGSCYYP-GLRFKELRF 365
                  Q  Y  Y+ +N+ARFL+E+YVFY AIL + YF+    G      G+RFKELRF
Sbjct: 75  EIASRIGQLYYNQYMRSNEARFLVEAYVFYEAILERKYFDAGGSGKAKVDVGVRFKELRF 134

Query: 366 H 368
           +
Sbjct: 135 Y 135


>ref|XP_002309960.1| predicted protein [Populus trichocarpa] gi|222852863|gb|EEE90410.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 28/121 (23%)
 Frame = +3

Query: 90  LLERAERKVTRVRDVLP-------NH--RKVISTYTDLWRF*QGS-----DAGDQRD--- 218
           L+E A+RK  RVRD LP       NH  +KV   Y  LW++ Q +     D+G  R    
Sbjct: 16  LVESADRKFGRVRD-LPLYGRAPQNHYFQKVFKAYMRLWKYQQENRSKLVDSGLNRWEIG 74

Query: 219 ---------YF-PYLGANKARFLLESYVFYGAILSKGYFEVERGGSCYYP-GLRFKELRF 365
                    YF  Y+ +++ARFL+E+YVFY AIL + YF+    G      G+RFKELRF
Sbjct: 75  EIASRIGQLYFNQYMRSSEARFLVEAYVFYEAILERKYFDARGSGKPKVDVGVRFKELRF 134

Query: 366 H 368
           +
Sbjct: 135 Y 135


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