BLASTX nr result

ID: Dioscorea21_contig00024394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024394
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW72059.1| hypothetical protein ZEAMMB73_612720 [Zea mays]         73   2e-11
ref|XP_002333922.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|EEE61156.1| hypothetical protein OsJ_15122 [Oryza sativa Japo...    72   6e-11
gb|EEC77445.1| hypothetical protein OsI_16250 [Oryza sativa Indi...    72   6e-11
emb|CAH67426.1| OSIGBa0150F01.6 [Oryza sativa Indica Group]            72   6e-11

>gb|AFW72059.1| hypothetical protein ZEAMMB73_612720 [Zea mays]
          Length = 123

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = -1

Query: 258 KQKMILKLTMEDDKKRSKAMQTAVGFCGVISVEIQGEAKDKLVVIGDGVDPVKMTSRLRK 79
           KQK+++K+ M  DK RSKAM+      GV SV I GE +DK+VV+GDGVD +K+T  LRK
Sbjct: 2   KQKIVIKVQMSCDKCRSKAMEVVAATLGVDSVAIDGEGRDKVVVVGDGVDSIKLTGALRK 61

Query: 78  KMRGTHV 58
           K+   H+
Sbjct: 62  KVGPAHL 68


>ref|XP_002333922.1| predicted protein [Populus trichocarpa]
           gi|224129254|ref|XP_002320539.1| predicted protein
           [Populus trichocarpa] gi|222839172|gb|EEE77523.1|
           predicted protein [Populus trichocarpa]
           gi|222861312|gb|EEE98854.1| predicted protein [Populus
           trichocarpa]
          Length = 121

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/75 (49%), Positives = 54/75 (72%)
 Frame = -1

Query: 258 KQKMILKLTMEDDKKRSKAMQTAVGFCGVISVEIQGEAKDKLVVIGDGVDPVKMTSRLRK 79
           KQK+++K+T+   K RSK++Q AVGF GV S  + G+ K ++ V+GDGVD V++T+RLRK
Sbjct: 2   KQKIVIKVTVNGPKSRSKSLQIAVGFSGVESAGLGGQDKSQIEVVGDGVDAVELTNRLRK 61

Query: 78  KMRGTHVNIESVAGV 34
           K+   +  I SVA V
Sbjct: 62  KV--GYAEIVSVAAV 74


>gb|EEE61156.1| hypothetical protein OsJ_15122 [Oryza sativa Japonica Group]
          Length = 126

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -1

Query: 258 KQKMILKLTMEDDKKRSKAMQTAVGFCGVISVEIQGEAKDKLVVIGDGVDPVKMTSRLRK 79
           KQKM++K++M   K RSKAM    G  GV SVE+ G+ KD+L V+GDGVDPV + +RLRK
Sbjct: 2   KQKMVIKVSMPCGKCRSKAMALVAGATGVSSVEVTGDGKDRLQVVGDGVDPVCVVNRLRK 61

Query: 78  KM 73
           K+
Sbjct: 62  KI 63


>gb|EEC77445.1| hypothetical protein OsI_16250 [Oryza sativa Indica Group]
          Length = 270

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -1

Query: 258 KQKMILKLTMEDDKKRSKAMQTAVGFCGVISVEIQGEAKDKLVVIGDGVDPVKMTSRLRK 79
           KQKM++K++M   K RSKAM    G  GV SVE+ G+ KD+L V+GDGVDPV + +RLRK
Sbjct: 2   KQKMVIKVSMPCGKCRSKAMALVAGATGVSSVEVTGDGKDRLQVVGDGVDPVCVVNRLRK 61

Query: 78  KM 73
           K+
Sbjct: 62  KI 63


>emb|CAH67426.1| OSIGBa0150F01.6 [Oryza sativa Indica Group]
          Length = 132

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -1

Query: 258 KQKMILKLTMEDDKKRSKAMQTAVGFCGVISVEIQGEAKDKLVVIGDGVDPVKMTSRLRK 79
           KQKM++K++M   K RSKAM    G  GV SVE+ G+ KD+L V+GDGVDPV + +RLRK
Sbjct: 2   KQKMVIKVSMPCGKCRSKAMALVAGATGVSSVEVTGDGKDRLQVVGDGVDPVCVVNRLRK 61

Query: 78  KM 73
           K+
Sbjct: 62  KI 63


Top