BLASTX nr result

ID: Dioscorea21_contig00024390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024390
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285576.1| PREDICTED: uncharacterized protein LOC100242...   189   2e-46
ref|XP_002324343.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|XP_002308715.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
emb|CBI21164.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002515395.1| conserved hypothetical protein [Ricinus comm...   181   4e-44

>ref|XP_002285576.1| PREDICTED: uncharacterized protein LOC100242360 [Vitis vinifera]
          Length = 146

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/142 (63%), Positives = 107/142 (75%), Gaps = 5/142 (3%)
 Frame = +1

Query: 49  CSCASPAASPPLLLVRRRSGGTGWAVFSP-----SMKSVKGPSLVVRASIVDSHESSSDF 213
           C C S     P +L + + G +   V  P     S +S+      VRAS+VDS+ESSS+F
Sbjct: 4   CVCCST----PAILGKSKEGVSNGVVLKPPGSISSSRSMNSRVFGVRASMVDSYESSSNF 59

Query: 214 AKRMEQAWLISQQPGPVACSSCESNGYVECKWCRGTGFFILGNNLLCEVPSRNTTCVICA 393
           AKRMEQAWLISQQP PV+C+SCE+ G+VECKWC GTGFFILGNN+LC+VPSRNT+CVICA
Sbjct: 60  AKRMEQAWLISQQPRPVSCTSCETKGHVECKWCGGTGFFILGNNMLCQVPSRNTSCVICA 119

Query: 394 GKGSACCPDCKGTGFRAKWLGD 459
           GKGS CC DCKGTGFRA WLG+
Sbjct: 120 GKGSTCCSDCKGTGFRAMWLGE 141


>ref|XP_002324343.1| predicted protein [Populus trichocarpa] gi|222865777|gb|EEF02908.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  184 bits (468), Expect = 5e-45
 Identities = 81/96 (84%), Positives = 90/96 (93%)
 Frame = +1

Query: 169 VRASIVDSHESSSDFAKRMEQAWLISQQPGPVACSSCESNGYVECKWCRGTGFFILGNNL 348
           VRAS+VDS+ES SDF KRMEQAWLISQQP PVAC+SC+SNG VEC+WCRGTGFFILG+N+
Sbjct: 1   VRASMVDSYESYSDFVKRMEQAWLISQQPRPVACTSCDSNGQVECQWCRGTGFFILGDNM 60

Query: 349 LCEVPSRNTTCVICAGKGSACCPDCKGTGFRAKWLG 456
           LC+VPSRNTTCVICAGKGS CC DCKGTGFRA+WLG
Sbjct: 61  LCQVPSRNTTCVICAGKGSMCCSDCKGTGFRARWLG 96


>ref|XP_002308715.1| predicted protein [Populus trichocarpa] gi|222854691|gb|EEE92238.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  184 bits (466), Expect = 8e-45
 Identities = 81/98 (82%), Positives = 93/98 (94%)
 Frame = +1

Query: 166 VVRASIVDSHESSSDFAKRMEQAWLISQQPGPVACSSCESNGYVECKWCRGTGFFILGNN 345
           VVRAS++DS+ESSSD AKRMEQAWLISQQP PV+C+SC+SNG+VEC+WCRGTGFFILG+N
Sbjct: 37  VVRASMLDSYESSSDIAKRMEQAWLISQQPRPVSCTSCDSNGHVECQWCRGTGFFILGDN 96

Query: 346 LLCEVPSRNTTCVICAGKGSACCPDCKGTGFRAKWLGD 459
           +LC+VPSRNTTCVICAGKGS  C DCKGTGFRAKWLG+
Sbjct: 97  MLCQVPSRNTTCVICAGKGSMRCSDCKGTGFRAKWLGE 134


>emb|CBI21164.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  183 bits (465), Expect = 1e-44
 Identities = 80/97 (82%), Positives = 91/97 (93%)
 Frame = +1

Query: 169 VRASIVDSHESSSDFAKRMEQAWLISQQPGPVACSSCESNGYVECKWCRGTGFFILGNNL 348
           VRAS+VDS+ESSS+FAKRMEQAWLISQQP PV+C+SCE+ G+VECKWC GTGFFILGNN+
Sbjct: 8   VRASMVDSYESSSNFAKRMEQAWLISQQPRPVSCTSCETKGHVECKWCGGTGFFILGNNM 67

Query: 349 LCEVPSRNTTCVICAGKGSACCPDCKGTGFRAKWLGD 459
           LC+VPSRNT+CVICAGKGS CC DCKGTGFRA WLG+
Sbjct: 68  LCQVPSRNTSCVICAGKGSTCCSDCKGTGFRAMWLGE 104


>ref|XP_002515395.1| conserved hypothetical protein [Ricinus communis]
           gi|223545339|gb|EEF46844.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 144

 Score =  181 bits (460), Expect = 4e-44
 Identities = 87/139 (62%), Positives = 98/139 (70%)
 Frame = +1

Query: 37  TTLYCSCASPAASPPLLLVRRRSGGTGWAVFSPSMKSVKGPSLVVRASIVDSHESSSDFA 216
           T   C C SPA    +  V          V      +       VRAS+VDS+ESSS+F 
Sbjct: 2   TNCICYCGSPAI---VANVSTNRAPINMGVVPRGTTTAFARVCRVRASVVDSYESSSNFI 58

Query: 217 KRMEQAWLISQQPGPVACSSCESNGYVECKWCRGTGFFILGNNLLCEVPSRNTTCVICAG 396
           KRMEQAWLISQQP PV C+SC SNG+V+CKWC GTGFFILG+N+LC+VPSRNTTCVICAG
Sbjct: 59  KRMEQAWLISQQPRPVGCTSCNSNGHVDCKWCAGTGFFILGDNILCQVPSRNTTCVICAG 118

Query: 397 KGSACCPDCKGTGFRAKWL 453
           KGS CC DCKGTGFRAKWL
Sbjct: 119 KGSMCCSDCKGTGFRAKWL 137


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