BLASTX nr result

ID: Dioscorea21_contig00024372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024372
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281745.1| PREDICTED: probable F-box protein At3g61730 ...   192   4e-47
ref|XP_003633984.1| PREDICTED: probable F-box protein At3g61730-...   192   6e-47
ref|XP_004140675.1| PREDICTED: probable F-box protein At3g61730-...   185   5e-45
ref|XP_003638662.1| hypothetical protein MTR_139s0011 [Medicago ...   183   2e-44
ref|XP_003636974.1| hypothetical protein MTR_066s1001, partial [...   183   2e-44

>ref|XP_002281745.1| PREDICTED: probable F-box protein At3g61730 [Vitis vinifera]
           gi|297745436|emb|CBI40516.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  192 bits (488), Expect = 4e-47
 Identities = 94/155 (60%), Positives = 119/155 (76%)
 Frame = -1

Query: 540 YDADTWTEVAKYLDGKSLVSLGLANRWFHRLIMQESIWRFAYLRDLQVPLPLRPPPFHCS 361
           Y+ D WTE+AK+LDGKSLV LG  N+WFH LIM++SIW+FA LRDLQ+P P +    +  
Sbjct: 24  YEEDIWTEIAKHLDGKSLVMLGTKNKWFHCLIMEDSIWKFACLRDLQLPEP-QHTFLNWI 82

Query: 360 NLYASAFGILRSHKFRQQERHIDWMRIGAFFFDSPAALLMETLALPRKVPEAGQDPQKSV 181
            LYASAF    S  FRQ+E+HIDWMRIGAFF DSP +LL E L+ P K+P+ G++  K++
Sbjct: 83  KLYASAFDGSHSFMFRQREKHIDWMRIGAFFLDSPISLLAEKLSCPLKIPQ-GENLGKTL 141

Query: 180 MASGAFVLTNIRTGIWIADLQLVRCPVCNLNTCEG 76
            + G  +L NI+TGIWIADLQLVRCPVC+LNTC+G
Sbjct: 142 ESCGFCILNNIKTGIWIADLQLVRCPVCDLNTCDG 176


>ref|XP_003633984.1| PREDICTED: probable F-box protein At3g61730-like [Vitis vinifera]
           gi|297745434|emb|CBI40514.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  192 bits (487), Expect = 6e-47
 Identities = 95/155 (61%), Positives = 118/155 (76%)
 Frame = -1

Query: 540 YDADTWTEVAKYLDGKSLVSLGLANRWFHRLIMQESIWRFAYLRDLQVPLPLRPPPFHCS 361
           Y+ D WTE+AK+LDGKSLV LG  N+WFH LIM++SIW+FA LRDLQ+P P +    +  
Sbjct: 24  YEEDIWTEIAKHLDGKSLVMLGTTNKWFHCLIMEDSIWKFACLRDLQLPEP-QHTFLNWI 82

Query: 360 NLYASAFGILRSHKFRQQERHIDWMRIGAFFFDSPAALLMETLALPRKVPEAGQDPQKSV 181
            LYASAF    S  FRQ+E+HIDWMRIGAFF DSP ALL E L  P K+P+ G++  K++
Sbjct: 83  KLYASAFDGSHSFMFRQREKHIDWMRIGAFFLDSPIALLAEKLNCPLKMPQ-GENLGKTL 141

Query: 180 MASGAFVLTNIRTGIWIADLQLVRCPVCNLNTCEG 76
            + G  +L NI+TGIWIADLQLVRCPVC+LNTC+G
Sbjct: 142 ESCGFCILNNIKTGIWIADLQLVRCPVCDLNTCDG 176


>ref|XP_004140675.1| PREDICTED: probable F-box protein At3g61730-like [Cucumis sativus]
           gi|449487411|ref|XP_004157613.1| PREDICTED: probable
           F-box protein At3g61730-like [Cucumis sativus]
          Length = 355

 Score =  185 bits (470), Expect = 5e-45
 Identities = 90/155 (58%), Positives = 112/155 (72%)
 Frame = -1

Query: 540 YDADTWTEVAKYLDGKSLVSLGLANRWFHRLIMQESIWRFAYLRDLQVPLPLRPPPFHCS 361
           YDAD WTEVAK+LDG+SL+ L   +RWF+R +M++SIW++  LRDLQVP P +   F   
Sbjct: 85  YDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDSIWKYVCLRDLQVPAP-QHTAFKWI 143

Query: 360 NLYASAFGILRSHKFRQQERHIDWMRIGAFFFDSPAALLMETLALPRKVPEAGQDPQKSV 181
            LY SAF    S+ FRQ E+H+DWMRIGAFF DS  ALL E L    K+P+  QD   + 
Sbjct: 144 KLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPK--QDSTDNT 201

Query: 180 MASGAFVLTNIRTGIWIADLQLVRCPVCNLNTCEG 76
           + SG  VL N++TGIWIADLQLVRCPVC+LNTC+G
Sbjct: 202 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDG 236


>ref|XP_003638662.1| hypothetical protein MTR_139s0011 [Medicago truncatula]
           gi|355504597|gb|AES85800.1| hypothetical protein
           MTR_139s0011 [Medicago truncatula]
          Length = 293

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/155 (59%), Positives = 109/155 (70%)
 Frame = -1

Query: 540 YDADTWTEVAKYLDGKSLVSLGLANRWFHRLIMQESIWRFAYLRDLQVPLPLRPPPFHCS 361
           +D D WTE+AK+LDGKSLV L   NRWF R+IM + IW+F  LRDLQVP P  P  F  S
Sbjct: 48  FDDDIWTEIAKFLDGKSLVMLAATNRWFRRVIMDDVIWKFVCLRDLQVPSP-PPVAFKWS 106

Query: 360 NLYASAFGILRSHKFRQQERHIDWMRIGAFFFDSPAALLMETLALPRKVPEAGQDPQKSV 181
           NLY SAF    S+KFRQQE+HIDWMRIGAF FDS  ALL E L  P ++ +  +  +  +
Sbjct: 107 NLYTSAFDGSHSYKFRQQEKHIDWMRIGAFSFDSSVALLTERLNFPGELKKE-ESMEMML 165

Query: 180 MASGAFVLTNIRTGIWIADLQLVRCPVCNLNTCEG 76
              G   L NI+ GIWIADLQLVRCPVC+LNTC+G
Sbjct: 166 KTHGCCFLDNIKPGIWIADLQLVRCPVCDLNTCDG 200


>ref|XP_003636974.1| hypothetical protein MTR_066s1001, partial [Medicago truncatula]
           gi|355502909|gb|AES84112.1| hypothetical protein
           MTR_066s1001, partial [Medicago truncatula]
          Length = 216

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/155 (59%), Positives = 109/155 (70%)
 Frame = -1

Query: 540 YDADTWTEVAKYLDGKSLVSLGLANRWFHRLIMQESIWRFAYLRDLQVPLPLRPPPFHCS 361
           +D D WTE+AK+LDGKSLV L   NRWF R+IM + IW+F  LRDLQVP P  P  F  S
Sbjct: 1   FDDDIWTEIAKFLDGKSLVMLAATNRWFRRVIMDDVIWKFVCLRDLQVPSP-PPVAFKWS 59

Query: 360 NLYASAFGILRSHKFRQQERHIDWMRIGAFFFDSPAALLMETLALPRKVPEAGQDPQKSV 181
           NLY SAF    S+KFRQQE+HIDWMRIGAF FDS  ALL E L  P ++ +  +  +  +
Sbjct: 60  NLYTSAFDGSHSYKFRQQEKHIDWMRIGAFSFDSSVALLTERLNFPGELKKE-ESMEMML 118

Query: 180 MASGAFVLTNIRTGIWIADLQLVRCPVCNLNTCEG 76
              G   L NI+ GIWIADLQLVRCPVC+LNTC+G
Sbjct: 119 KTHGCCFLDNIKPGIWIADLQLVRCPVCDLNTCDG 153


Top