BLASTX nr result

ID: Dioscorea21_contig00024347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024347
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323779.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    57   2e-06
ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
gb|AAL32541.1| Unknown protein [Arabidopsis thaliana]                  55   4e-06

>ref|XP_002323779.1| predicted protein [Populus trichocarpa] gi|222866781|gb|EEF03912.1|
            predicted protein [Populus trichocarpa]
          Length = 910

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1    SKGK-DLKSSGPAWYYASDAYIRGVSLKEVLQSDAYILFYERVEN 132
            +KGK D +  G  WYYASDA++R VSL+EVL+ DAY+LFYE+V N
Sbjct: 866  NKGKADKEQGGSVWYYASDAHVREVSLEEVLRCDAYLLFYEKVSN 910


>ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 1052

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +1

Query: 4    KGKDLKSSGPAWYYASDAYIRGVSLKEVLQSDAYILFYERV 126
            KG D ++ G  WY ASDAY+R VSL EVL+ +AYILFYE++
Sbjct: 1012 KGGDKENEGSTWYQASDAYVREVSLDEVLRCEAYILFYEKI 1052


>ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|222847428|gb|EEE84975.1|
            predicted protein [Populus trichocarpa]
          Length = 925

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +1

Query: 4    KGK-DLKSSGPAWYYASDAYIRGVSLKEVLQSDAYILFYERVEN 132
            KG+ D +  G  WYYASDA+++ VSL+EVL+ DAY+LFYE++ N
Sbjct: 882  KGRADKEQGGSVWYYASDAHVQEVSLEEVLRCDAYLLFYEKISN 925


>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
            gi|223542682|gb|EEF44219.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1006

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 1    SKGKDLKSSGPA-WYYASDAYIRGVSLKEVLQSDAYILFYERV 126
            SKGK    SG + WY+ASDAY+R VSL+EVL+ +AYILFYE++
Sbjct: 964  SKGKAENESGSSVWYHASDAYVREVSLEEVLRCEAYILFYEKI 1006


>gb|AAL32541.1| Unknown protein [Arabidopsis thaliana]
          Length = 961

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +1

Query: 10   KDLKSSGPAWYYASDAYIRGVSLKEVLQSDAYILFYERV 126
            K+  SS  AWY  SDAY+R VSL++VL S+AYILFYER+
Sbjct: 919  KETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERI 957


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