BLASTX nr result
ID: Dioscorea21_contig00024345
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00024345 (1109 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S... 64 7e-08 ref|XP_003571395.1| PREDICTED: uncharacterized protein LOC100824... 62 3e-07 gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana] 60 1e-06 pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 59 2e-06 emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera] 59 2e-06 >ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor] gi|241918649|gb|EER91793.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor] Length = 295 Score = 63.9 bits (154), Expect = 7e-08 Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Frame = +2 Query: 650 LKIISWNCRGLSNPRTVDRILDILKNKSPDFLCLVETKTSIPRLQRFCLMIKHSWEWAAI 829 +KI++WNCRGL++ R V +L++ + ++PD L L ET S +++ L K E AI Sbjct: 1 MKILAWNCRGLASHRAVRALLEVQRRENPDVLFLSETHLSKAKVEN--LKRKVGCEKFAI 58 Query: 830 -PSNGFSGGILVLWKRSFGNVTPVATSRWVLHLVITSNGITWVLSTVYNSQVEK 988 S+G SGG+L+LWK+ V PV S++ + +V+ W L+ +Y K Sbjct: 59 HESDGRSGGLLMLWKKEV-VVRPVNISQYYIDVVMEEEE-EWRLTGIYGDPYHK 110 >ref|XP_003571395.1| PREDICTED: uncharacterized protein LOC100824808 [Brachypodium distachyon] Length = 975 Score = 61.6 bits (148), Expect = 3e-07 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Frame = +2 Query: 635 MLFMNLKIISWNCRGLSNPRTVDRILDILKNKSPDFLCLVETKTSI--PRLQRFCLMIKH 808 ML N+ ++ WN RGL+NP + D++++ +C+ ETK + RL R L Sbjct: 1 MLQHNVNLVCWNVRGLNNPSRQAAVRDLIRDTHATIICIQETKLQVVDDRLIRDLLGHCF 60 Query: 809 SWEWAAIPSNGFSGGILVLWKRSFGNVTPVATSRWVLHLVIT--SNGITWVLSTVYNSQ 979 S +A +P+ G GG+L+ F ++ V S + + +T S G W L++VY Q Sbjct: 61 SANFAVLPAAGTRGGMLLAASEDFFTISNVHLSAHSITVTVTMRSKGAMWSLTSVYGPQ 119 >gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana] Length = 238 Score = 60.1 bits (144), Expect = 1e-06 Identities = 36/104 (34%), Positives = 57/104 (54%) Frame = +2 Query: 659 ISWNCRGLSNPRTVDRILDILKNKSPDFLCLVETKTSIPRLQRFCLMIKHSWEWAAIPSN 838 + WNC+GL TV R+ +I + PD +CL ETK ++ C + S + +PS Sbjct: 57 LCWNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFS-NFVMVPSM 115 Query: 839 GFSGGILVLWKRSFGNVTPVATSRWVLHLVITSNGITWVLSTVY 970 G SGG++VLWK S +++ S ++ + SN + + LS VY Sbjct: 116 GLSGGLVVLWKPSV-HISVSFNSPNLVDCYVQSNEVGFNLSFVY 158 >pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana (fragment) Length = 1365 Score = 59.3 bits (142), Expect = 2e-06 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Frame = +2 Query: 656 IISWNCRGLSNPRTVDRILDILKNKSPDFLCLVETKTSIPRLQRFCLMIKHSWEWAAIPS 835 +ISWNC+GL NP T+ + ++ K+ PD L L+ETK S + + + + + P Sbjct: 2 VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEP- 60 Query: 836 NGFSGGILVLWKRSFGNVTPVATSRWVLHLVITSNGITWVLSTVYNSQV----EKVW 994 G SGG+ + WK S + + + ++ L ++S W +S VY V K+W Sbjct: 61 EGRSGGLAIFWK-SHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLW 116 >emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera] Length = 1780 Score = 59.3 bits (142), Expect = 2e-06 Identities = 27/75 (36%), Positives = 46/75 (61%) Frame = +2 Query: 647 NLKIISWNCRGLSNPRTVDRILDILKNKSPDFLCLVETKTSIPRLQRFCLMIKHSWEWAA 826 ++KIISWN RGL + + + L+++ PD + + ETK R + + +WAA Sbjct: 753 HMKIISWNTRGLGSKKKRRVVKXFLRSEKPDVVMIQETKKECDRRFVGSVWTARNKDWAA 812 Query: 827 IPSNGFSGGILVLWK 871 +P++G SGGIL++W+ Sbjct: 813 LPASGASGGILIIWE 827