BLASTX nr result

ID: Dioscorea21_contig00024342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024342
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142936.1| PREDICTED: U-box domain-containing protein 4...    59   4e-07
ref|XP_003531187.1| PREDICTED: U-box domain-containing protein 6...    56   3e-06
ref|XP_003524886.1| PREDICTED: U-box domain-containing protein 6...    56   3e-06
emb|CBI27590.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002264918.1| PREDICTED: U-box domain-containing protein 6...    56   3e-06

>ref|XP_004142936.1| PREDICTED: U-box domain-containing protein 45-like [Cucumis
           sativus] gi|449494446|ref|XP_004159548.1| PREDICTED:
           U-box domain-containing protein 45-like [Cucumis
           sativus]
          Length = 778

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/45 (66%), Positives = 31/45 (68%)
 Frame = -3

Query: 137 MDNAEVEENLFAAGDAKLHAGMCGKLYEFVSTVLGIFPVFEAARP 3
           MD +EVEENLFAA DAKLH GMC  L      VL IFP  EAARP
Sbjct: 1   MDISEVEENLFAASDAKLHRGMCKTLSALYCKVLSIFPSLEAARP 45


>ref|XP_003531187.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 766

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/45 (64%), Positives = 30/45 (66%)
 Frame = -3

Query: 137 MDNAEVEENLFAAGDAKLHAGMCGKLYEFVSTVLGIFPVFEAARP 3
           MD AEVEENLFAA DAKLH  MC  L      VL +FP  EAARP
Sbjct: 2   MDVAEVEENLFAASDAKLHGQMCKTLSIIYCKVLSVFPSLEAARP 46


>ref|XP_003524886.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 764

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/45 (64%), Positives = 30/45 (66%)
 Frame = -3

Query: 137 MDNAEVEENLFAAGDAKLHAGMCGKLYEFVSTVLGIFPVFEAARP 3
           MD AEVEENLFAA DAKLH  MC  L      VL +FP  EAARP
Sbjct: 2   MDVAEVEENLFAASDAKLHGQMCKTLSIIYCKVLSVFPSLEAARP 46


>emb|CBI27590.3| unnamed protein product [Vitis vinifera]
          Length = 706

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -3

Query: 137 MDNAEVEENLFAAGDAKLHAGMCGKLYEFVSTVLGIFPVFEAARP 3
           MD  EVEE+LFA  DAKLH GMC  L      +L IFPV EAARP
Sbjct: 1   MDIHEVEESLFAVSDAKLHGGMCRMLSTIYCKILEIFPVLEAARP 45


>ref|XP_002264918.1| PREDICTED: U-box domain-containing protein 6-like [Vitis vinifera]
          Length = 783

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -3

Query: 137 MDNAEVEENLFAAGDAKLHAGMCGKLYEFVSTVLGIFPVFEAARP 3
           MD  EVEE+LFA  DAKLH GMC  L      +L IFPV EAARP
Sbjct: 1   MDIHEVEESLFAVSDAKLHGGMCRMLSTIYCKILEIFPVLEAARP 45


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