BLASTX nr result

ID: Dioscorea21_contig00024333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024333
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528452.1| conserved hypothetical protein [Ricinus comm...    73   2e-16
ref|XP_002315239.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-16
dbj|BAK02555.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   2e-14
ref|XP_002279262.1| PREDICTED: elongator complex protein 1 [Viti...    68   2e-14
emb|CBI31709.3| unnamed protein product [Vitis vinifera]               68   2e-14

>ref|XP_002528452.1| conserved hypothetical protein [Ricinus communis]
            gi|223532128|gb|EEF33935.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1335

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = -3

Query: 291  KICALDCANTLVAEYKE*TDKVGQYLACYLTVCESRFTLAAKLHSEDRRIGDGEYDLVYE 112
            KI +++ ANTL++EY+E  +KVG+YL  YL V + R  LAAKL SEDR + D +YD V E
Sbjct: 1110 KIASVEGANTLISEYEEGREKVGKYLTRYLAVRQRRLLLAAKLQSEDRSVNDLDYDTVSE 1169

Query: 111  ASSSFS 94
            ASS+FS
Sbjct: 1170 ASSNFS 1175



 Score = 37.0 bits (84), Expect(2) = 2e-16
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
 Frame = -1

Query: 407  IALDYCADVD*GGV---MKA*EWEEPLMFDYAHERDDLVSLIKYA 282
            IAL+YC DV  GG+   + A +WEE L   + H  +DL+S +K A
Sbjct: 1069 IALEYCGDVS-GGISLLINARDWEEALRVAFMHMGEDLISDVKIA 1112


>ref|XP_002315239.1| predicted protein [Populus trichocarpa] gi|222864279|gb|EEF01410.1|
            predicted protein [Populus trichocarpa]
          Length = 1326

 Score = 72.4 bits (176), Expect(2) = 6e-16
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = -3

Query: 300  LPYKICALDCANTLVAEYKE*TDKVGQYLACYLTVCESRFTLAAKLHSEDRRIGDGEYDL 121
            L  K  ALDCA+TL++E+KE  +KVG+YL  YL V + R  LAAKL SE+R I D + D 
Sbjct: 1113 LEVKNAALDCASTLISEHKEGLEKVGKYLTRYLAVRQRRLLLAAKLQSEERSINDLDDDT 1172

Query: 120  VYEASSSFS 94
            V EASS+FS
Sbjct: 1173 VSEASSNFS 1181



 Score = 36.2 bits (82), Expect(2) = 6e-16
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = -1

Query: 407  IALDYCADVD*GG--VMKA*EWEEPLMFDYAHERDDLVSLIKYA 282
            IAL+YC DV+ G   ++ A +WEE L   + H ++DLV  +K A
Sbjct: 1075 IALEYCGDVNSGINLLISARDWEEALRVAFMHRQEDLVLEVKNA 1118


>dbj|BAK02555.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1325

 Score = 60.8 bits (146), Expect(2) = 2e-14
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = -3

Query: 291  KICALDCANTLVAEYKE*TDKVGQYLACYLTVCESRFTLAAKLHSEDRRIGDGEYDLVYE 112
            K  AL+CA  L++EY+E   KVG+YLA Y+ V + R +LAAKL SEDR + D E D + E
Sbjct: 1115 KDAALECAALLISEYQEGLLKVGKYLARYVAVRQRRLSLAAKLQSEDRFM-DVEDDNISE 1173

Query: 111  ASSSFS 94
             SSSFS
Sbjct: 1174 VSSSFS 1179



 Score = 42.4 bits (98), Expect(2) = 2e-14
 Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -1

Query: 407  IALDYCADVD*GG--VMKA*EWEEPLMFDYAHERDDLVSLIKYA 282
            IAL+YC+DVD G    + A EWEE L   Y H R DLV  +K A
Sbjct: 1074 IALEYCSDVDRGVGCYIMAREWEEALRVAYMHSRQDLVDTVKDA 1117


>ref|XP_002279262.1| PREDICTED: elongator complex protein 1 [Vitis vinifera]
          Length = 1316

 Score = 68.2 bits (165), Expect(2) = 2e-14
 Identities = 36/63 (57%), Positives = 44/63 (69%)
 Frame = -3

Query: 282  ALDCANTLVAEYKE*TDKVGQYLACYLTVCESRFTLAAKLHSEDRRIGDGEYDLVYEASS 103
            +L+CA  L+ EY+E  +KVG+YLA YL V + R  LAAKL SEDR I D + D   EASS
Sbjct: 1110 SLECATLLIGEYEEGLEKVGKYLARYLAVRQRRLLLAAKLQSEDRSINDLDDDTASEASS 1169

Query: 102  SFS 94
            SFS
Sbjct: 1170 SFS 1172



 Score = 35.0 bits (79), Expect(2) = 2e-14
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -1

Query: 407  IALDYCADVD*GG--VMKA*EWEEPLMFDYAHERDDLVSLIKYA 282
            IALDYC DV      ++ A +WEE L   + H  DDL+S ++ A
Sbjct: 1066 IALDYCGDVKSAINLLVSARDWEEALRVAFMHRCDDLISEVQNA 1109


>emb|CBI31709.3| unnamed protein product [Vitis vinifera]
          Length = 1200

 Score = 68.2 bits (165), Expect(2) = 2e-14
 Identities = 36/63 (57%), Positives = 44/63 (69%)
 Frame = -3

Query: 282  ALDCANTLVAEYKE*TDKVGQYLACYLTVCESRFTLAAKLHSEDRRIGDGEYDLVYEASS 103
            +L+CA  L+ EY+E  +KVG+YLA YL V + R  LAAKL SEDR I D + D   EASS
Sbjct: 994  SLECATLLIGEYEEGLEKVGKYLARYLAVRQRRLLLAAKLQSEDRSINDLDDDTASEASS 1053

Query: 102  SFS 94
            SFS
Sbjct: 1054 SFS 1056



 Score = 35.0 bits (79), Expect(2) = 2e-14
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -1

Query: 407  IALDYCADVD*GG--VMKA*EWEEPLMFDYAHERDDLVSLIKYA 282
            IALDYC DV      ++ A +WEE L   + H  DDL+S ++ A
Sbjct: 950  IALDYCGDVKSAINLLVSARDWEEALRVAFMHRCDDLISEVQNA 993


Top