BLASTX nr result

ID: Dioscorea21_contig00024326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024326
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycin...   119   4e-25
ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   119   4e-25
gb|AFK40203.1| unknown [Lotus japonicus]                              119   6e-25
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...   118   9e-25
gb|EEE57177.1| hypothetical protein OsJ_07114 [Oryza sativa Japo...   117   1e-24

>ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
           gi|255637253|gb|ACU18957.1| unknown [Glycine max]
          Length = 105

 Score =  119 bits (298), Expect = 4e-25
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = -2

Query: 454 PASKRAKDSEDDFDGIVVGEIGKNRRVSVRSWQGRVVVDIREFYVKDGKTLPGRKGISLP 275
           P     KDS+DD D + + EI KNRRV+VR+W+G ++VDIREFYVKDGK LPGRKGISL 
Sbjct: 24  PMKSLKKDSDDDPDSVTICEISKNRRVAVRNWKGSIMVDIREFYVKDGKQLPGRKGISLT 83

Query: 274 MDQWKILRDHINEIDKLVKENS 209
           MDQW +LR+H+ EIDK V ENS
Sbjct: 84  MDQWNVLRNHVEEIDKAVNENS 105


>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  119 bits (298), Expect = 4e-25
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = -2

Query: 457 APASKRAKDSEDDFDGIVVGEIGKNRRVSVRSWQGRVVVDIREFYVKDGKTLPGRKGISL 278
           AP+ K +    DD D I+V EI +NRRVSVR+WQG+V VDIREFYVKDGK +PG+KGISL
Sbjct: 21  APSKKSSMKDSDDPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKKGISL 80

Query: 277 PMDQWKILRDHINEIDKLVKENS 209
            MDQW +LRDH+NEID+ V +N+
Sbjct: 81  TMDQWNVLRDHVNEIDEAVADNA 103


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/102 (57%), Positives = 69/102 (67%)
 Frame = -2

Query: 517 RGKKXXXXXXXXXXXXXXDMAPASKRAKDSEDDFDGIVVGEIGKNRRVSVRSWQGRVVVD 338
           +GKK                 P     KDS++D D IVV EI KNRRVSVR+WQGR+VVD
Sbjct: 4   KGKKRDDLDRASDADSDSHAPPKKSLKKDSDEDPDSIVVCEISKNRRVSVRNWQGRIVVD 63

Query: 337 IREFYVKDGKTLPGRKGISLPMDQWKILRDHINEIDKLVKEN 212
           I EFYVKDGK +PG+KGISL MDQW +LR+HI EIDK V E+
Sbjct: 64  ILEFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAVNES 105


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score =  118 bits (295), Expect = 9e-25
 Identities = 55/83 (66%), Positives = 65/83 (78%)
 Frame = -2

Query: 457 APASKRAKDSEDDFDGIVVGEIGKNRRVSVRSWQGRVVVDIREFYVKDGKTLPGRKGISL 278
           AP SK  K   DD D IVV E+ KNRRV VR+WQG++VVDIREFYVKDGK +PG+KGISL
Sbjct: 19  APPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISL 78

Query: 277 PMDQWKILRDHINEIDKLVKENS 209
            +DQW +L +H+ EIDK V ENS
Sbjct: 79  SLDQWNVLLNHVEEIDKAVNENS 101


>gb|EEE57177.1| hypothetical protein OsJ_07114 [Oryza sativa Japonica Group]
          Length = 427

 Score =  117 bits (294), Expect = 1e-24
 Identities = 65/120 (54%), Positives = 77/120 (64%), Gaps = 8/120 (6%)
 Frame = -2

Query: 544 SPKSEE---MWKRGKKXXXXXXXXXXXXXXDMAPASKRAK-----DSEDDFDGIVVGEIG 389
           SP+ E    MW++G K                 PA+KR        SE   D IVV +I 
Sbjct: 318 SPEGESVRRMWRKGNKRFGGGGE----------PAAKRRAAGDDGPSESADDDIVVAQIS 367

Query: 388 KNRRVSVRSWQGRVVVDIREFYVKDGKTLPGRKGISLPMDQWKILRDHINEIDKLVKENS 209
           KNRRV+VR+W G+VVVDIREFY KDGKTLPGRKGI LPMDQWKILRD+I  ID+ +KEN+
Sbjct: 368 KNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRKGIQLPMDQWKILRDNIKAIDEAIKENA 427


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