BLASTX nr result

ID: Dioscorea21_contig00024314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024314
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298978.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
ref|XP_002277944.1| PREDICTED: probable F-box protein At1g60180-...   109   6e-22
emb|CBI32366.3| unnamed protein product [Vitis vinifera]              101   2e-19
ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vit...   101   2e-19
emb|CAN62852.1| hypothetical protein VITISV_010156 [Vitis vinifera]   101   2e-19

>ref|XP_002298978.1| predicted protein [Populus trichocarpa] gi|222846236|gb|EEE83783.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  117 bits (292), Expect = 3e-24
 Identities = 59/152 (38%), Positives = 97/152 (63%)
 Frame = -3

Query: 749 KRLDELRLSWVLLDSRNGVAVNLSSWRPTLVEKNWPSEGNLLVRFSCPLPVDQQLLGGAG 570
           K +++LRLSW+L+D + G AVNLSSW+P  V+KNWP     +++F C LPV++ LL    
Sbjct: 206 KLIEDLRLSWILVDKKTGKAVNLSSWKPLSVQKNWPYHATYVMQFGCVLPVEESLL-PQK 264

Query: 569 GVECVIDLRFRVLERPMAKTELRMVEVTLQVEDVDGMHVNGRGSLMVLYWALSCSTRSRD 390
               ++  RF++ ER      L   E+++++E+++G HVNGR SLM+L  AL  S RS +
Sbjct: 265 LARFIVTTRFKITEREEC---LEWREISMRIENIEGAHVNGRSSLMILNKAL-YSQRSTN 320

Query: 389 RRAIEEGYLKYQSKQKAALDVKNRKERLVDKM 294
           +  +EEG  KY+ +++  +  +  +E L D++
Sbjct: 321 QFKVEEGLRKYEKQKREMMRRRESREALADRL 352


>ref|XP_002277944.1| PREDICTED: probable F-box protein At1g60180-like [Vitis vinifera]
          Length = 381

 Score =  109 bits (273), Expect = 6e-22
 Identities = 61/153 (39%), Positives = 96/153 (62%)
 Frame = -3

Query: 749 KRLDELRLSWVLLDSRNGVAVNLSSWRPTLVEKNWPSEGNLLVRFSCPLPVDQQLLGGAG 570
           K L++LRLSWVL D + G AVNLSSW+P LV+++W S  + ++RF C +P+D+ LL    
Sbjct: 215 KELEDLRLSWVLFDKKKGKAVNLSSWKPLLVQRSWHSGMDYMLRFGCIVPMDEHLLPHK- 273

Query: 569 GVECVIDLRFRVLERPMAKTELRMVEVTLQVEDVDGMHVNGRGSLMVLYWALSCSTRSRD 390
             ECVI ++  + E       +   E+++ VED+ G  ++GR SLMVL  AL C  RS++
Sbjct: 274 LAECVILVKCMLTE---GGGPVMWREISMNVEDMAGAPLSGRKSLMVLNRALYC-LRSKN 329

Query: 389 RRAIEEGYLKYQSKQKAALDVKNRKERLVDKMC 291
              +EEGY +++ +++     K  +E L D++C
Sbjct: 330 HLELEEGYRRFEREKREIKRRKELREALADRLC 362


>emb|CBI32366.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  101 bits (252), Expect = 2e-19
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
 Frame = -3

Query: 740 DELRLSWVLLDSRNGVAVNLSSWRPTLVEKNWPSEGNLLVRFSCPLPVDQQLLGGAGGVE 561
           D +RLSW++L+ +   A NLSSW P   +++WP++ + L+RF   +P    L      VE
Sbjct: 95  DGIRLSWIVLNRKIKQAANLSSWSPLGGQRHWPTDKDFLIRFGSVIPAKDIL--PCRVVE 152

Query: 560 CVIDLRFRVL--ERPMAKTELRMVEVTLQVEDVDGMHVNGRGSLMVLYWALSCSTRSRDR 387
           C++ ++FRV+  E    +T L++ E+++Q+ED++G HVNGR SL++L  ALSC  RS++ 
Sbjct: 153 CILVMKFRVIHTEGDGVQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSCH-RSKNY 211

Query: 386 RAIEEGYLKYQSKQKAALDVKNRKERLVDKMC 291
               E    Y   Q    + K R E  +DK C
Sbjct: 212 GEFLESCNLYSKVQNELKEEKMRIESRLDKFC 243


>ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 379

 Score =  101 bits (252), Expect = 2e-19
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
 Frame = -3

Query: 740 DELRLSWVLLDSRNGVAVNLSSWRPTLVEKNWPSEGNLLVRFSCPLPVDQQLLGGAGGVE 561
           D +RLSW++L+ +   A NLSSW P   +++WP++ + L+RF   +P    L      VE
Sbjct: 215 DGIRLSWIVLNRKIKQAANLSSWSPLGGQRHWPTDKDFLIRFGSVIPAKDIL--PCRVVE 272

Query: 560 CVIDLRFRVL--ERPMAKTELRMVEVTLQVEDVDGMHVNGRGSLMVLYWALSCSTRSRDR 387
           C++ ++FRV+  E    +T L++ E+++Q+ED++G HVNGR SL++L  ALSC  RS++ 
Sbjct: 273 CILVMKFRVIHTEGDGVQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSCH-RSKNY 331

Query: 386 RAIEEGYLKYQSKQKAALDVKNRKERLVDKMC 291
               E    Y   Q    + K R E  +DK C
Sbjct: 332 GEFLESCNLYSKVQNELKEEKMRIESRLDKFC 363


>emb|CAN62852.1| hypothetical protein VITISV_010156 [Vitis vinifera]
          Length = 365

 Score =  101 bits (252), Expect = 2e-19
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
 Frame = -3

Query: 740 DELRLSWVLLDSRNGVAVNLSSWRPTLVEKNWPSEGNLLVRFSCPLPVDQQLLGGAGGVE 561
           D +RLSW++L+ +   A NLSSW P   +++WP++ + L+RF   +P    L      VE
Sbjct: 201 DGIRLSWIVLNRKIKQAANLSSWSPLGGQRHWPTDKDFLIRFGSVIPAKDIL--PCRVVE 258

Query: 560 CVIDLRFRVL--ERPMAKTELRMVEVTLQVEDVDGMHVNGRGSLMVLYWALSCSTRSRDR 387
           C++ ++FRV+  E    +T L++ E+++Q+ED++G HVNGR SL++L  ALSC  RS++ 
Sbjct: 259 CILVMKFRVIHTEGDGVQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSCH-RSKNY 317

Query: 386 RAIEEGYLKYQSKQKAALDVKNRKERLVDKMC 291
               E    Y   Q    + K R E  +DK C
Sbjct: 318 GEFLESCNLYSKVQNELKEEKMRIESRLDKFC 349


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