BLASTX nr result

ID: Dioscorea21_contig00024297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024297
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG28912.1|AC008113_28 F12A21.3 [Arabidopsis thaliana]             117   5e-24
ref|NP_564908.1| chloroplast sensor kinase [Arabidopsis thaliana...   117   5e-24
ref|XP_002887148.1| hypothetical protein ARALYDRAFT_894541 [Arab...   116   8e-24
ref|XP_002315662.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]              115   1e-23

>gb|AAG28912.1|AC008113_28 F12A21.3 [Arabidopsis thaliana]
          Length = 610

 Score =  117 bits (292), Expect = 5e-24
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = +2

Query: 2   TQMHPLIPFGPNLFSHGMVEDNVTWNFIAGLTVAREILESYGCVIRVISPCRPDAALSAG 181
           TQMH L PFG  L S  MVEDN+TWNF+AGLTVAREILESYGCVIRVISP   DAAL AG
Sbjct: 530 TQMHSLTPFGAELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSDAALGAG 589

Query: 182 GTRIEIWLPSLQSEFDSVQE 241
           GTR+E+WLP+  +      E
Sbjct: 590 GTRVELWLPAFPAAVSEANE 609


>ref|NP_564908.1| chloroplast sensor kinase [Arabidopsis thaliana]
           gi|332196584|gb|AEE34705.1| chloroplast sensor kinase
           [Arabidopsis thaliana]
          Length = 611

 Score =  117 bits (292), Expect = 5e-24
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = +2

Query: 2   TQMHPLIPFGPNLFSHGMVEDNVTWNFIAGLTVAREILESYGCVIRVISPCRPDAALSAG 181
           TQMH L PFG  L S  MVEDN+TWNF+AGLTVAREILESYGCVIRVISP   DAAL AG
Sbjct: 531 TQMHSLTPFGAELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSDAALGAG 590

Query: 182 GTRIEIWLPSLQSEFDSVQE 241
           GTR+E+WLP+  +      E
Sbjct: 591 GTRVELWLPAFPAAVSEANE 610


>ref|XP_002887148.1| hypothetical protein ARALYDRAFT_894541 [Arabidopsis lyrata subsp.
           lyrata] gi|297332989|gb|EFH63407.1| hypothetical protein
           ARALYDRAFT_894541 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  116 bits (290), Expect = 8e-24
 Identities = 55/80 (68%), Positives = 60/80 (75%)
 Frame = +2

Query: 2   TQMHPLIPFGPNLFSHGMVEDNVTWNFIAGLTVAREILESYGCVIRVISPCRPDAALSAG 181
           TQMH L PFG  L S  MVEDN+TWNF+AGLTVAREILESYGCVIRVISP   DAAL AG
Sbjct: 530 TQMHSLTPFGAELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSDAALGAG 589

Query: 182 GTRIEIWLPSLQSEFDSVQE 241
           GTR+E+WLP   +      E
Sbjct: 590 GTRVELWLPPFPAAVSEANE 609


>ref|XP_002315662.1| predicted protein [Populus trichocarpa] gi|222864702|gb|EEF01833.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  115 bits (289), Expect = 1e-23
 Identities = 55/73 (75%), Positives = 60/73 (82%)
 Frame = +2

Query: 2   TQMHPLIPFGPNLFSHGMVEDNVTWNFIAGLTVAREILESYGCVIRVISPCRPDAALSAG 181
           TQM  LIPFG  LFS  MVEDN+TWNF+AGLTVAREILE+YGCV+RVISP   DAAL  G
Sbjct: 391 TQMRSLIPFGAELFSENMVEDNMTWNFVAGLTVAREILENYGCVVRVISPRVSDAALGTG 450

Query: 182 GTRIEIWLPSLQS 220
           GTRIE+WLPS  S
Sbjct: 451 GTRIELWLPSFAS 463


>gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]
          Length = 771

 Score =  115 bits (289), Expect = 1e-23
 Identities = 55/73 (75%), Positives = 60/73 (82%)
 Frame = +2

Query: 2   TQMHPLIPFGPNLFSHGMVEDNVTWNFIAGLTVAREILESYGCVIRVISPCRPDAALSAG 181
           TQM  LIPFG  LFS  MVEDN+TWNF+AGLTVAREILE+YGCV+RVISP   DAAL  G
Sbjct: 689 TQMRSLIPFGAELFSENMVEDNMTWNFVAGLTVAREILENYGCVVRVISPRVSDAALGTG 748

Query: 182 GTRIEIWLPSLQS 220
           GTRIE+WLPS  S
Sbjct: 749 GTRIELWLPSFAS 761


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