BLASTX nr result

ID: Dioscorea21_contig00024289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024289
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559255.1| PREDICTED: transcription factor bHLH106-like...   174   4e-41
ref|XP_003520487.1| PREDICTED: transcription factor bHLH106-like...   172   1e-40
ref|XP_002466222.1| hypothetical protein SORBIDRAFT_01g003830 [S...   169   1e-39
ref|XP_003554115.1| PREDICTED: transcription factor bHLH106-like...   168   2e-39
gb|ADL36594.1| BHLH domain class transcription factor [Malus x d...   168   2e-39

>ref|XP_003559255.1| PREDICTED: transcription factor bHLH106-like [Brachypodium
           distachyon]
          Length = 255

 Score =  174 bits (440), Expect = 4e-41
 Identities = 108/188 (57%), Positives = 126/188 (67%), Gaps = 9/188 (4%)
 Frame = -3

Query: 818 DRALLASKNHXXXXXXXXXRIKSHMDRLRTLLACDPKTDKASLLAKAVEHVRDLKQRTAE 639
           +RA+ A++NH         RIKSH+DRLR +LACDPK DKASLLAKAVE VRDLKQR A 
Sbjct: 69  ERAVAATRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRMAG 128

Query: 638 I------AETQLFPSESDEIIVIPGDELSSSDGRRLVYKASLCCEDRSDLFPELIDXXXX 477
           I      A  QLFP+E DEI+V     L+SS G   V++AS+CC+DRSDL P LID    
Sbjct: 129 IGAESAAATPQLFPTEHDEIVV-----LASSGG---VFEASVCCDDRSDLLPGLIDTLRA 180

Query: 476 XXXXXXXAEMATLGGRVRNVLVLAGDSEVHQEDDTGAGGFLKDALKELVDRRTV---SGD 306
                  AEMATLGGRVRNVLVLA D+    EDD G G FLK+AL+ LV+R      +GD
Sbjct: 181 LRLRTLRAEMATLGGRVRNVLVLARDAGA--EDDDGGGDFLKEALRALVERHGAAAGAGD 238

Query: 305 RLKRRRTV 282
           R KRRRTV
Sbjct: 239 RPKRRRTV 246


>ref|XP_003520487.1| PREDICTED: transcription factor bHLH106-like [Glycine max]
          Length = 249

 Score =  172 bits (436), Expect = 1e-40
 Identities = 105/201 (52%), Positives = 131/201 (65%), Gaps = 7/201 (3%)
 Frame = -3

Query: 857 SFYPMDLTM--DAPL--DRALLASKNHXXXXXXXXXRIKSHMDRLRTLLACDPKTDKASL 690
           S YP  L+   + P   DRAL A KNH         RI SH+D+LRTLL C+ KTDKASL
Sbjct: 50  SSYPFHLSQITETPSHHDRALAAMKNHKEAEKRRRERINSHLDQLRTLLPCNSKTDKASL 109

Query: 689 LAKAVEHVRDLKQRTAEIAETQLFPSESDEIIVIP---GDELSSSDGRRLVYKASLCCED 519
           LAK V+ V++LKQ+T+EI E +  PSE+DEI V+    GD  S  D  RL++KASLCCED
Sbjct: 110 LAKVVQRVKELKQQTSEITELETVPSETDEITVLATTGGDYASGGDDGRLIFKASLCCED 169

Query: 518 RSDLFPELIDXXXXXXXXXXXAEMATLGGRVRNVLVLAGDSEVHQEDDTGAGGFLKDALK 339
           RSDL P+LI+           AEMATLGGR RNVL++A D E   E    +  FL+++LK
Sbjct: 170 RSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLIVAADKEHSIE----SIHFLQNSLK 225

Query: 338 ELVDRRTVSGDRLKRRRTVDR 276
            L+DR + SGDR KRRR +DR
Sbjct: 226 SLLDRSS-SGDRSKRRRGLDR 245


>ref|XP_002466222.1| hypothetical protein SORBIDRAFT_01g003830 [Sorghum bicolor]
           gi|241920076|gb|EER93220.1| hypothetical protein
           SORBIDRAFT_01g003830 [Sorghum bicolor]
          Length = 267

 Score =  169 bits (427), Expect = 1e-39
 Identities = 111/228 (48%), Positives = 130/228 (57%), Gaps = 34/228 (14%)
 Frame = -3

Query: 869 YFMASFYPMDLTMD---------APLDRALLASKNHXXXXXXXXXRIKSHMDRLRTLLAC 717
           +FM S +P     D         A  DRAL AS+NH         RIKSH+DRLR +LAC
Sbjct: 37  FFMGSIWPASSEEDEAAAAAAAAAAHDRALAASRNHREAEKRRRERIKSHLDRLRNVLAC 96

Query: 716 DPKTDKASLLAKAVEHVRDLKQRTA---EIAETQLFPSESDEIIVIPGDELSSSDGRRLV 546
           DPK DKASLLAKAVE VRDLKQR A   E A   LFP+E DEI+V+       + G   V
Sbjct: 97  DPKIDKASLLAKAVERVRDLKQRAAGVGEAAPAHLFPTEHDEIVVL-------ASGSGAV 149

Query: 545 YKASLCCEDRSDLFPELIDXXXXXXXXXXXAEMATLGGRVRNVLVLAGD----SEVHQED 378
           ++AS+CC+DRSDL P+LI+           AEMATLGGRVRNVLVLA D      V   D
Sbjct: 150 FEASVCCDDRSDLLPDLIETLRALRLRTLRAEMATLGGRVRNVLVLARDVADGGVVVTGD 209

Query: 377 DTGAGG------------------FLKDALKELVDRRTVSGDRLKRRR 288
           D G GG                  FLK+AL+ LV+R   +GDR KRRR
Sbjct: 210 DDGYGGRAADSVGATDGANGTGGDFLKEALRALVERPGAAGDRPKRRR 257


>ref|XP_003554115.1| PREDICTED: transcription factor bHLH106-like [Glycine max]
          Length = 251

 Score =  168 bits (426), Expect = 2e-39
 Identities = 102/201 (50%), Positives = 130/201 (64%), Gaps = 7/201 (3%)
 Frame = -3

Query: 857 SFYPMDLTM--DAPL--DRALLASKNHXXXXXXXXXRIKSHMDRLRTLLACDPKTDKASL 690
           ++YP  L+   + P   DRAL A KNH         RI SH+D LRTLL C+ KTDKASL
Sbjct: 52  NYYPFHLSQITETPSHHDRALAAMKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASL 111

Query: 689 LAKAVEHVRDLKQRTAEIAETQLFPSESDEIIVIP---GDELSSSDGRRLVYKASLCCED 519
           LAK V+ V++LKQ+T+EI E +  PSE+DEI V+    GD  S     RL++KASLCCED
Sbjct: 112 LAKVVQRVKELKQQTSEITELETVPSETDEITVLSTTGGDYASGGGDGRLIFKASLCCED 171

Query: 518 RSDLFPELIDXXXXXXXXXXXAEMATLGGRVRNVLVLAGDSEVHQEDDTGAGGFLKDALK 339
           RSDL P+LI+           AEMATLGGR RNVLV+A D E   E    +  FL+++L+
Sbjct: 172 RSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAADKEHSIE----SIHFLQNSLR 227

Query: 338 ELVDRRTVSGDRLKRRRTVDR 276
            ++DR + SGDR KRRR +DR
Sbjct: 228 SILDRSS-SGDRSKRRRGLDR 247


>gb|ADL36594.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 240

 Score =  168 bits (426), Expect = 2e-39
 Identities = 101/199 (50%), Positives = 136/199 (68%), Gaps = 6/199 (3%)
 Frame = -3

Query: 857 SFYPMDLT-----MDA-PLDRALLASKNHXXXXXXXXXRIKSHMDRLRTLLACDPKTDKA 696
           S+YP++L+      DA P DRAL A KNH         RI SH+D+LR LL C+ KTDKA
Sbjct: 44  SYYPLELSGVSTEHDASPQDRALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKA 103

Query: 695 SLLAKAVEHVRDLKQRTAEIAETQLFPSESDEIIVIPGDELSSSDGRRLVYKASLCCEDR 516
           SLLAK V+ V++LKQ+T+EIAE + FPSE+DEI V+  ++  ++DG R+V+KASLCCEDR
Sbjct: 104 SLLAKVVQRVKELKQQTSEIAELETFPSETDEITVLSSNDY-TNDG-RIVFKASLCCEDR 161

Query: 515 SDLFPELIDXXXXXXXXXXXAEMATLGGRVRNVLVLAGDSEVHQEDDTGAGGFLKDALKE 336
           SDL P+LI+           AE+ATLGGR+RNVL++A D +   E    +  FL++ALK 
Sbjct: 162 SDLLPDLIEILKSLHLKTIKAEIATLGGRIRNVLIVAADKDHTIE----SVNFLQNALKS 217

Query: 335 LVDRRTVSGDRLKRRRTVD 279
           L++R   S +R KRRR +D
Sbjct: 218 LLERSN-SSERSKRRRVLD 235


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