BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024266
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ99273.1| predicted protein [Hordeum vulgare subsp. vulgare]     99   3e-19
ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] g...    98   6e-19
gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indi...    98   6e-19
ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation spec...    98   8e-19
ref|XP_003560694.1| PREDICTED: cleavage and polyadenylation spec...    97   2e-18

>dbj|BAJ99273.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 693

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/105 (46%), Positives = 66/105 (62%)
 Frame = +1

Query: 1   PTVIVHKQVTVRQESENHVSLQWXXXXXXXXXXXXXXALILNISREGPKVMPVXXXXXXX 180
           PT+IVHK+VT+R ESE HV+LQW              A+ILNI R+GPKV+P+       
Sbjct: 556 PTLIVHKRVTIRLESEIHVTLQWSSDYISDMVSDSVVAMILNIGRQGPKVVPIEEAAKTE 615

Query: 181 XXXXXXIQKVVYSLLVSLFGNVKAGEAGRLIVTVDGDTAKVDWKN 315
                  QKVVY+L+ SLFG+VK  E G L+++VDGD A +D ++
Sbjct: 616 EETEKVAQKVVYALMASLFGDVKVAEEGELVISVDGDVAHLDGRS 660


>ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group]
           gi|27573349|gb|AAO20067.1| putative cleavage and
           polyadenylation specifity factor protein [Oryza sativa
           Japonica Group] gi|29126360|gb|AAO66552.1| putative
           cleavage and polyadenylation specifity factor [Oryza
           sativa Japonica Group] gi|108712151|gb|ABF99946.1|
           Cleavage and polyadenylation specificity factor, 73 kDa
           subunit, putative, expressed [Oryza sativa Japonica
           Group] gi|113550399|dbj|BAF13842.1| Os03g0852900 [Oryza
           sativa Japonica Group] gi|125588676|gb|EAZ29340.1|
           hypothetical protein OsJ_13407 [Oryza sativa Japonica
           Group]
          Length = 700

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/105 (45%), Positives = 68/105 (64%)
 Frame = +1

Query: 1   PTVIVHKQVTVRQESENHVSLQWXXXXXXXXXXXXXXALILNISREGPKVMPVXXXXXXX 180
           PT+IVH++VT+R ESE++V+LQW              A++LNI REGPKV+PV       
Sbjct: 563 PTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQ 622

Query: 181 XXXXXXIQKVVYSLLVSLFGNVKAGEAGRLIVTVDGDTAKVDWKN 315
                  QKVVY+L+VSLFG+VK  E G+L+++VDG  A +D ++
Sbjct: 623 EETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQVAHLDGRS 667


>gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indica Group]
          Length = 700

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/105 (45%), Positives = 68/105 (64%)
 Frame = +1

Query: 1   PTVIVHKQVTVRQESENHVSLQWXXXXXXXXXXXXXXALILNISREGPKVMPVXXXXXXX 180
           PT+IVH++VT+R ESE++V+LQW              A++LNI REGPKV+PV       
Sbjct: 563 PTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQ 622

Query: 181 XXXXXXIQKVVYSLLVSLFGNVKAGEAGRLIVTVDGDTAKVDWKN 315
                  QKVVY+L+VSLFG+VK  E G+L+++VDG  A +D ++
Sbjct: 623 EETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQVAHLDGRS 667


>ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Brachypodium distachyon]
          Length = 768

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/102 (47%), Positives = 66/102 (64%)
 Frame = +1

Query: 1   PTVIVHKQVTVRQESENHVSLQWXXXXXXXXXXXXXXALILNISREGPKVMPVXXXXXXX 180
           PT+IVH++VT+R ESE++V+LQW              A+ILNI REGPKV+PV       
Sbjct: 631 PTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPVEEAEKTQ 690

Query: 181 XXXXXXIQKVVYSLLVSLFGNVKAGEAGRLIVTVDGDTAKVD 306
                  +KVVY+L+VSLFG+VK  E G+ +++VDGD A +D
Sbjct: 691 EETEKVARKVVYALMVSLFGDVKVAEGGKFVISVDGDVAHLD 732


>ref|XP_003560694.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Brachypodium distachyon]
          Length = 690

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/102 (47%), Positives = 66/102 (64%)
 Frame = +1

Query: 1   PTVIVHKQVTVRQESENHVSLQWXXXXXXXXXXXXXXALILNISREGPKVMPVXXXXXXX 180
           PT+IVH++VT+R ESE++V+LQW              A+ILNI REGPKV+PV       
Sbjct: 553 PTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPVEEAEKTQ 612

Query: 181 XXXXXXIQKVVYSLLVSLFGNVKAGEAGRLIVTVDGDTAKVD 306
                  +KVVY+L+VSLF +VK  E G+L+++VDGD A +D
Sbjct: 613 DETEKVARKVVYALMVSLFADVKVAEEGKLVISVDGDVAHLD 654