BLASTX nr result

ID: Dioscorea21_contig00024232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024232
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533555.1| conserved hypothetical protein [Ricinus comm...    49   6e-06

>ref|XP_002533555.1| conserved hypothetical protein [Ricinus communis]
           gi|223526571|gb|EEF28827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score = 48.9 bits (115), Expect(2) = 6e-06
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +1

Query: 187 MSHGDTIPLHSSAQSDIDEIETLINAA 267
           MSH DTIPLH+S+QSDIDEIE LINA+
Sbjct: 1   MSHSDTIPLHASSQSDIDEIENLINAS 27



 Score = 25.8 bits (55), Expect(2) = 6e-06
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +3

Query: 261 RCPCPPRPPTKSSSRLHPNLLLALHPFQSPQQAPLRP 371
           R P PPR P  SS  +  NL       Q P   P  P
Sbjct: 39  RPPSPPRIPVSSSPFIQSNLPPPRPTSQKPPSVPAAP 75


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